Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI283650.1	-	1			Chr. X - 53266329 - 53266701 [+] on Build GRCh38	125
GenBankmRNA	BQ187376.1	-	1	465		Chr. X - 53266401 - 53267025 [-] on Build GRCh38	125
GenBankmRNA	AI818771.1	-	1			Chr. X - 53266327 - 53266731 [+] on Build GRCh38	125
GenBankmRNA	AW772452.1	-	1			Chr. X - 53266334 - 53266683 [+] on Build GRCh38	125
GenBankmRNA	AI915845.1	-	1			Chr. X - 53266328 - 53266723 [+] on Build GRCh38	125
GenBankmRNA	CK300690.1	-	1			Chr. X - 53266329 - 53266903 [+] on Build GRCh38	125
GenBankmRNA	CA446613.1	-	1			Chr. X - 53266328 - 53281535 [+] on Build GRCh38	125
GenBankmRNA	AI870808.1	-	1			Chr. X - 53266328 - 53266678 [+] on Build GRCh38	125
GenBankmRNA	AW264518.1	-	1			Chr. X - 53266329 - 53266774 [+] on Build GRCh38	125
GenBankmRNA	BU158163.1	-		172		Chr. - - [-] on Build	125
GenBankmRNA	HY240568.1	-	1			Chr. X - 53266328 - 53266727 [+] on Build GRCh38	125
GenBankmRNA	AW291798.1	-	1			Chr. X - 53266329 - 53266727 [+] on Build GRCh38	125
GenBankmRNA	AW026036.1	-	1			Chr. X - 53266326 - 53266772 [+] on Build GRCh38	125
GenBankmRNA	AJ711626.1	-	1	183		Chr. X - 53266328 - 53266743 [-] on Build GRCh38	125

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	lysine demethylase 5C	KDM5C	DXS1272E, JARID1C, MRX13, MRXJ, MRXSCJ, MRXSJ, SMCX, XE169	-40.9kb	Sense	Chr. - 53159735 - 53225422 on Build GRCh38
Downstream	structural maintenance of chromosomes 1A	SMC1A	CDLS2, DXS423E, SB1.8, SMC1, SMC1L1, SMC1alpha, SMCB	107.1kb	Sense	Chr. - 53374149 - 53422728 on Build GRCh38

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