Product Details

Assay Reference Genome
Location

Chr.16:46660364 on build GRCh38
Cytoband
16q11.2
Species
Homo sapiens
Variation Type
Copy Number

Additional Information

Target Gene Details

Entrez Gene ID
55737
Gene Symbol
VPS35
Gene Name
VPS35 retromer complex component
Gene Aliases
MEM3, PARK17
Location
Chr.16:46657979-46689232 on build GRCh38
Assay Gene Location
Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Location Protein ID
VPS35 NM_018206.5 17 2598 NP_060676.2
XM_005256045.3 16 2483 XP_005256102.1
XM_011523227.2 17 3328 XP_011521529.1
AF175265.1 17 2556 AAF89953.1
AF183418.1 16 2507 AAG09687.1
AF186382.1 17 2552 AAG40619.1
AF191298.2 17 2526 AAF02778.2
AK000395.1 5 959 BAA91137.1
AK001614.1 17 2546 BAA91790.1
AK023650.1 13 2109 BAB14626.1
AK223218.1 17 2517 BAD96938.1
AL136888.1 17 2546 CAB66822.1
AL512769.1 10 1603 CAC21686.1
AY007112.1 6 1109 AAG01989.1
BC002414.2 16 2505 AAH02414.1
BC010362.1 17 2519 AAH10362.1
BC093036.1 17 2544 AAH93036.1
BQ574179.1
BX647213.1 10 4335 CAI46268.1

Target Copy Number Variation Details

DGV Version
Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv526656 Chr16:46505480 - 46812751 on Build GRCh38 Gain MYLK3 VPS35 ANKRD26P1 C16orf87 SHCBP1 ORC6
nsv428327 Chr16:46523056 - 46684578 on Build GRCh38 Gain VPS35 ANKRD26P1 SHCBP1
dgv2975n100 Chr16:46429858 - 46768065 on Build GRCh38 Gain MYLK3 VPS35 ANKRD26P1 SHCBP1 ORC6
esv3571142 Chr16:46430577 - 46840772 on Build GRCh38 Gain MYLK3 VPS35 ANKRD26P1 C16orf87 SHCBP1 ORC6
esv3638534 Chr16:46547097 - 46716009 on Build GRCh38 Gain MYLK3 VPS35 ANKRD26P1 SHCBP1 ORC6

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