Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: B3GALT5-AS1
Entrez Gene ID: 114041
Gene Name: B3GALT5 antisense RNA 1
Gene Aliases: C21orf88
Chromosome Location: Chr.21: 39597147 - 39612822 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_026542.1		1 - 2	531	145
GenBank mRNA	AF426266.1	-	1 - 2	150	145
	BC119737.2	-	1 - 2	124	145
	BC119738.2	-	1 - 2	124	145

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AA112450.1	-	1 - 2			Chr. 21 - 39597850 - 39612440 [-] on Build GRCh38	146

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	SH3 domain binding glutamate rich protein	SH3BGR	21-GARP	-94.1kb	Anti-sense	Chr. - 39445865 - 39515506 on Build GRCh38
Downstream	beta-1,3-galactosyltransferase 5	B3GALT5	B3GalT-V, B3GalTx, B3T5, GLCT5, beta-1,3-GalTase 5, beta-3-Gx-T5, beta3Gal-T5	500.0	Anti-sense	Chr. - 39612940 - 39662889 on Build GRCh38

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