Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- SNHG4
- Entrez Gene ID
-
724102
- Gene Name
- small nucleolar RNA host gene 4
- Gene Aliases
-
NCRNA00059, U19H
- Chromosome Location
-
Chr.5: 139273752 - 139283184 on Build GRCh38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_036536.1 |
|
5 - 5 |
929 |
109 |
| GenBank mRNA |
AJ224168.1 |
- |
5 - 5 |
551 |
109 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BE897291.1 |
- |
|
412 |
|
Chr. - - [-] on Build |
109 |
| GenBankmRNA |
CV575818.1 |
- |
1 |
320 |
|
Chr. 5 - 139282745 - 139283305 [+] on Build GRCh38 |
109 |
| GenBankmRNA |
BU171950.1 |
- |
5 |
563 |
|
Chr. 5 - 139274118 - 139283244 [+] on Build GRCh38 |
109 |
| GenBankmRNA |
CN412460.1 |
- |
1 |
472 |
|
Chr. 5 - 139282594 - 139283175 [+] on Build GRCh38 |
109 |
| GenBankmRNA |
BF811475.1 |
- |
1 |
121 |
|
Chr. 5 - 139282955 - 139283242 [+] on Build GRCh38 |
109 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
small nucleolar RNA, H/ACA box 74A |
SNORA74A |
RNU19, U19 |
-3.8kb
|
Sense |
Chr. - 139278780 - 139278979 on Build GRCh38 |
| Downstream |
poly(A) binding protein interacting protein 2 |
PAIP2 |
PAIP-2, PAIP2A |
58.7kb
|
Sense |
Chr. - 139341832 - 139369720 on Build GRCh38 |
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