Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CHRAC1
Entrez Gene ID
54108
Gene Name
chromatin accessibility complex 1
Gene Aliases
CHARC1, CHARC15, CHRAC-1, CHRAC-15, CHRAC15, YCL1
Chromosome Location
Chr.8: 140511298 - 140517153 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_023360.2 1 - 2 347 100
GenBank mRNA AK308709.1 - 1 - 2 217 100
AL543044.3 - 1 - 2 334 100


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA HY067691.1 - 1 - 2 340 Chr. 8 - 140511304 - 140515246 [+] on Build GRCh38 100
GenBankmRNA BE158974.1 - 1 - 2 Chr. 8 - 140511516 - 140515452 [-] on Build GRCh38 100
GenBankmRNA BE158978.1 - 1 - 2 129 Chr. 8 - 140511516 - 140515446 [+] on Build GRCh38 100
GenBankmRNA BE159028.1 - 1 - 2 Chr. 8 - 140511516 - 140515445 [-] on Build GRCh38 100
GenBankmRNA CN360556.1 - 1 - 2 200 Chr. 8 - 140511461 - 140515395 [+] on Build GRCh38 100
GenBankmRNA DC313125.1 - 1 - 2 218 Chr. 8 - 140511428 - 140515465 [+] on Build GRCh38 100
GenBankmRNA BE159040.1 - 1 - 2 150 Chr. 8 - 140511497 - 140515446 [+] on Build GRCh38 100
GenBankmRNA AL557850.3 - 1 - 2 226 Chr. 8 - 140511462 - 140515983 [+] on Build GRCh38 100
GenBankmRNA BG679861.1 - 1 - 2 325 Chr. 8 - 140511320 - 140515522 [+] on Build GRCh38 100
GenBankmRNA BE159121.1 - 1 - 2 Chr. 8 - 140511516 - 140515451 [-] on Build GRCh38 100
GenBankmRNA BE158979.1 - 1 - 2 Chr. 8 - 140511516 - 140515451 [-] on Build GRCh38 100


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream trafficking protein particle complex 9 TRAPPC9 IBP, IKBKBBP, MRT13, NIBP, T1, TRS120 -52.7kb Anti-sense Chr. - 139727725 - 140458579 on Build GRCh38
Downstream argonaute 2, RISC catalytic component AGO2 EIF2C2, Q10 3.0kb Anti-sense Chr. - 140520158 - 140642406 on Build GRCh38

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