Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: SOCS7
Entrez Gene ID: 30837
Gene Name: suppressor of cytokine signaling 7
Gene Aliases: NAP4, NCKAP4
Chromosome Location: Chr.17: 38351876 - 38405593 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_014598.3	NP_055413.1	10 - 10	4592	56
	XM_017024551.1	XP_016880040.1	9 - 9	4738	56
	XM_017024552.1	XP_016880041.1	8 - 8	4633	56
GenBank mRNA	AK094338.1	-	1 - 1	2047	56

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BU629609.1	-	1			Chr. 17 - 38402112 - 38402760 [-] on Build GRCh38	56
GenBankmRNA	BE249857.1	-		136		Chr. - - [-] on Build	56
GenBankmRNA	BI255871.1	-	1	296		Chr. 17 - 38401911 - 38402783 [+] on Build GRCh38	56
GenBankmRNA	BE293552.1	-	1	137		Chr. 17 - 38402071 - 38402484 [+] on Build GRCh38	56
GenBankmRNA	HY263203.1	-	1			Chr. 17 - 38402054 - 38402532 [-] on Build GRCh38	56
GenBankmRNA	BG329927.1	-		240		Chr. - - [-] on Build	56
GenBankmRNA	DA834203.1	-	1	469		Chr. 17 - 38401739 - 38402438 [+] on Build GRCh38	56
GenBankmRNA	BE796289.1	-	1	477		Chr. 17 - 38401731 - 38402507 [+] on Build GRCh38	56
GenBankmRNA	BF691440.1	-	1	351		Chr. 17 - 38401856 - 38402594 [+] on Build GRCh38	56

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	G protein-coupled receptor 179	GPR179	CSNB1E, GPR158L, GPR158L1	-56.4kb	Anti-sense	Chr. - 38325610 - 38343810 on Build GRCh38
Downstream	Rho GTPase activating protein 23	ARHGAP23		16.6kb	Sense	Chr. - 38419286 - 38512392 on Build GRCh38

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