Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
NKAPP1
Entrez Gene ID
158801
Gene Name
NFKB activating protein pseudogene 1
Gene Aliases
CXorf42
Chromosome Location
Chr.X: 120236452 - 120245267 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_027131.1 1 - 1 457 93
GenBank mRNA AK093895.1 - 1 - 1 423 93
BC022359.1 - 1 - 1 397 93
BC113730.1 - 1 - 1 396 93
BC113732.1 - 1 - 1 396 93
BX537594.1 - 1 - 1 449 93
DB004517.1 - 1 - 1 459 93


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB202379.1 - 1 423 Chr. X - 120240252 - 120245233 [-] on Build GRCh38 93
GenBankmRNA AW611964.1 - 3 Chr. X - 120238209 - 120245035 [+] on Build GRCh38 93
GenBankmRNA DA017113.1 - 1 401 Chr. X - 120240281 - 120245211 [-] on Build GRCh38 93
GenBankmRNA BG527810.1 - 1 398 Chr. X - 120238193 - 120245207 [-] on Build GRCh38 93
GenBankmRNA DA017116.1 - 1 402 Chr. X - 120240280 - 120245211 [-] on Build GRCh38 93
GenBankmRNA DA951669.1 - 1 427 Chr. X - 120240260 - 120245237 [-] on Build GRCh38 93
GenBankmRNA DA226807.1 - 1 401 Chr. X - 120240244 - 120245211 [-] on Build GRCh38 93
GenBankmRNA BQ638190.1 - 1 251 Chr. X - 120221348 - 120245061 [-] on Build GRCh38 93
GenBankmRNA DA196773.1 - 1 78 Chr. X - 120120953 - 120244888 [-] on Build GRCh38 93
GenBankmRNA AW013941.1 - 3 Chr. X - 120238194 - 120244916 [+] on Build GRCh38 93


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream Rhox homeobox family member 2 RHOXF2 CT107, PEPP-2, PEPP2, THG1 -76.3kb Anti-sense Chr. - 120158534 - 120164039 on Build GRCh38
Downstream zinc finger and BTB domain containing 33 ZBTB33 ZNF-kaiso, ZNF348 5.5kb Anti-sense Chr. - 120250752 - 120258396 on Build GRCh38

View Full Product Details