Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
PGAP2
Entrez Gene ID
27315
Gene Name
post-GPI attachment to proteins 2
Gene Aliases
CWH43-N, FRAG1, HPMRS3, MRT17, MRT21
Chromosome Location
Chr.11: 3797724 - 3826371 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_027018.2 3 - 4 186 77
XM_006718192.1 XP_006718255.1 4 - 5 368 77
XM_006718193.2 XP_006718256.1 3 - 4 175 77
XM_011520006.2 XP_011518308.1 3 - 4 589 77
XM_011520007.2 XP_011518309.1 4 - 5 358 77
GenBank mRNA AK295202.1 - 3 - 4 186 77
BI460657.1 - 4 - 5 431 77


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA HY023313.1 - 4 - 5 333 Chr. 11 - 3797934 - 3823913 [+] on Build GRCh38 77
GenBankmRNA HY005082.1 - 4 - 5 358 Chr. 11 - 3798026 - 3823693 [+] on Build GRCh38 77
GenBankmRNA HY171270.1 - 3 - 4 354 Chr. 11 - 3808560 - 3823742 [+] on Build GRCh38 77
GenBankmRNA HY174290.1 - 3 - 4 354 Chr. 11 - 3808560 - 3823742 [+] on Build GRCh38 77
GenBankmRNA CD244183.1 - 2 - 3 244 Chr. 11 - 3811267 - 3824313 [+] on Build GRCh38 77
GenBankmRNA HY034063.1 - 4 - 5 326 Chr. 11 - 3797941 - 3823726 [+] on Build GRCh38 77
GenBankmRNA HY034481.1 - 4 - 5 348 Chr. 11 - 3797919 - 3823940 [+] on Build GRCh38 77
GenBankmRNA DC325619.1 - 3 - 4 187 Chr. 11 - 3808010 - 3824135 [+] on Build GRCh38 77
GenBankmRNA HY009734.1 - 4 - 5 333 Chr. 11 - 3797934 - 3823937 [+] on Build GRCh38 77
GenBankmRNA CD300100.1 - 4 - 5 393 Chr. 11 - 3798017 - 3824357 [+] on Build GRCh38 77
GenBankmRNA DC394985.1 - 4 - 5 368 Chr. 11 - 3797898 - 3823925 [+] on Build GRCh38 77
GenBankmRNA HY000936.1 - 4 - 5 333 Chr. 11 - 3797934 - 3823912 [+] on Build GRCh38 77


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream nucleoporin 98 NUP98 ADIR2, NUP196, NUP96 -25.1kb Anti-sense Chr. - 3675010 - 3797792 on Build GRCh38
Downstream ras homolog family member G RHOG ARHG 3.2kb Anti-sense Chr. - 3826978 - 3840983 on Build GRCh38

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