Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PEX5L
Entrez Gene ID
51555
Gene Name
peroxisomal biogenesis factor 5 like
Gene Aliases
PEX5R, PEX5RP, PXR2, PXR2B, TRIP8b
Chromosome Location
Chr.3: 179794958 - 180037053 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001256750.1 NP_001243679.1 15 - 15 8088 91
NM_001256751.1 NP_001243680.1 14 - 14 8022 91
NM_001256752.1 NP_001243681.1 14 - 14 7989 91
NM_001256753.1 NP_001243682.1 13 - 13 7917 91
NM_001256754.1 NP_001243683.1 15 - 15 7824 91
NM_001256755.1 NP_001243684.1 14 - 14 7629 91
NM_001256756.1 NP_001243685.1 14 - 14 7719 91
NM_016559.2 NP_057643.1 15 - 15 8094 91
XM_011512882.2 XP_011511184.1 16 - 16 8706 91
XM_011512884.2 XP_011511186.1 16 - 16 8702 91
XM_011512885.2 XP_011511187.1 16 - 16 8117 91
XM_011512886.2 XP_011511188.1 15 - 15 7923 91
XM_011512887.2 XP_011511189.1 14 - 14 7485 91
XM_011512888.2 XP_011511190.1 14 - 14 7785 91
XM_011512891.2 XP_011511193.1 13 - 13 8282 91
XM_011512892.2 XP_011511194.1 12 - 12 8088 91
XM_017006601.1 XP_016862090.1 15 - 15 8514 91
XM_017006602.1 XP_016862091.1 15 - 15 7919 91
XM_017006603.1 XP_016862092.1 15 - 15 8510 91
XM_017006604.1 XP_016862093.1 13 - 13 9100 91
XM_017006605.1 XP_016862094.1 13 - 13 7785 91
XM_017006606.1 XP_016862095.1 15 - 15 8591 91
XM_017006607.1 XP_016862096.1 14 - 14 9288 91
XM_017006608.1 XP_016862097.1 14 - 14 7938 91
XM_017006609.1 XP_016862098.1 14 - 14 8431 91
XM_017006610.1 XP_016862099.1 13 - 13 7866 91
XM_017006611.1 XP_016862100.1 13 - 13 8243 91
GenBank mRNA AL831863.1 - 1 - 1 2053 91


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BM541932.1 - 110 Chr. - - [-] on Build 91


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream ubiquitin specific peptidase 13 (isopeptidase T-3) USP13 ISOT3, IsoT-3 -5.6kb Anti-sense Chr. - 179653145 - 179789401 on Build GRCh38
Downstream PEX5L antisense RNA 2 PEX5L-AS2 100.1kb Anti-sense Chr. - 179898194 - 179921899 on Build GRCh38

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