Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: ZMAT3
Entrez Gene ID: 64393
Gene Name: zinc finger matrin-type 3
Gene Aliases: PAG608, WIG-1, WIG1
Chromosome Location: Chr.3: 179017223 - 179072279 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_022470.3	NP_071915.1	6 - 6	7277	94
	NM_152240.2	NP_689426.1	7 - 7	7395	94
	XM_005247706.2	XP_005247763.1	6 - 6	7685	94
	XM_011513073.1	XP_011511375.1	7 - 7	7809	94
GenBank mRNA	BC036485.1	-	1 - 1	1152	94

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	BE892688.1	-	1	274		Chr. 3 - 179018428 - 179019214 [-] on Build GRCh38	94
GenBankmRNA	BU963826.1	-	1	128		Chr. 3 - 179018320 - 179019065 [-] on Build GRCh38	94
GenBankmRNA	DA526995.1	-	1	367		Chr. 3 - 179018745 - 179019307 [-] on Build GRCh38	94
GenBankmRNA	BG393038.1	-	1	376		Chr. 3 - 179018608 - 179019294 [-] on Build GRCh38	94
GenBankmRNA	DB110579.1	-	1	196		Chr. 3 - 179018532 - 179019136 [-] on Build GRCh38	94

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	KCNMB2 antisense RNA 1	KCNMB2-AS1		-156.8kb	Sense	Chr. - 178525467 - 178860405 on Build GRCh38
Downstream	uncharacterized LOC101928739	LOC101928739		81.3kb	Sense	Chr. - 179101371 - 179147973 on Build GRCh38

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