Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
DENND1B
Entrez Gene ID
163486
Gene Name
DENN domain containing 1B
Gene Aliases
C1ORF18, C1orf218, FAM31B
Chromosome Location
Chr.1: 197504748 - 197782138 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001195215.1 NP_001182144.1 23 - 23 6251 90
NR_125340.1 20 - 20 5998 90
XM_005244931.2 XP_005244988.1 22 - 22 6191 90
XM_006711192.2 XP_006711255.1 24 - 24 6161 90
XM_006711193.3 XP_006711256.1 24 - 24 6293 90
XM_006711194.3 XP_006711257.1 11 - 11 16289 90
XM_011509246.2 XP_011507548.1 23 - 23 6112 90
XM_011509247.1 XP_011507549.1 22 - 22 6052 90
XM_011509248.2 XP_011507550.1 23 - 23 6045 90
XM_011509249.2 XP_011507551.1 24 - 24 6350 90
XM_017000470.1 XP_016855959.1 24 - 24 6239 90
XM_017000471.1 XP_016855960.1 23 - 23 6101 90
XM_017000472.1 XP_016855961.1 19 - 19 5725 90
GenBank mRNA AK093982.1 - 1 - 1 144 90


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DB244207.1 - 1 234 Chr. 1 - 197506544 - 197507107 [-] on Build GRCh38 90
GenBankmRNA DB249531.1 - 1 144 Chr. 1 - 197506456 - 197507018 [-] on Build GRCh38 90


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream crumbs 1, cell polarity complex component CRB1 LCA8, RP12 -26.3kb Anti-sense Chr. - 197201462 - 197478455 on Build GRCh38
Downstream chromosome 1 open reading frame 53 C1orf53 395.5kb Anti-sense Chr. - 197902552 - 197907367 on Build GRCh38

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