Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PAWR
Entrez Gene ID
5074
Gene Name
pro-apoptotic WT1 regulator
Gene Aliases
PAR4, Par-4
Chromosome Location
Chr.12: 79587791 - 79691097 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_006719436.3 XP_006719499.1 5 - 5 3448 104
GenBank mRNA AK027848.2 - 1 - 1 949 104


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BE714100.1 - 1 173 Chr. 12 - 79601935 - 79602485 [-] on Build GRCh38 104
GenBankmRNA BE714098.1 - 1 170 Chr. 12 - 79601935 - 79602486 [-] on Build GRCh38 104
GenBankmRNA BG109597.1 - 1 342 Chr. 12 - 79601907 - 79602671 [-] on Build GRCh38 104
GenBankmRNA BE714096.1 - 1 Chr. 12 - 79601943 - 79602472 [+] on Build GRCh38 104
GenBankmRNA BE714099.1 - 1 Chr. 12 - 79601932 - 79602487 [+] on Build GRCh38 104
GenBankmRNA BE714095.1 - 1 163 Chr. 12 - 79601935 - 79602486 [-] on Build GRCh38 104
GenBankmRNA DB108278.1 - 1 374 Chr. 12 - 79602133 - 79602703 [-] on Build GRCh38 104
GenBankmRNA CA395056.1 - 1 59 Chr. 12 - 79601867 - 79602388 [-] on Build GRCh38 104
GenBankmRNA CD242102.1 - 1 351 Chr. 12 - 79601907 - 79602678 [-] on Build GRCh38 104
GenBankmRNA BE714093.1 - 1 173 Chr. 12 - 79601935 - 79602486 [-] on Build GRCh38 104


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream synaptotagmin 1 SYT1 P65, SVP65, SYT -149.2kb Anti-sense Chr. - 78863993 - 79452008 on Build GRCh38
Downstream protein phosphatase 1 regulatory subunit 12A PPP1R12A M130, MBS, MYPT1 170.3kb Sense Chr. - 79773563 - 79935455 on Build GRCh38

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