Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
USB1
Entrez Gene ID
79650
Gene Name
U6 snRNA biogenesis phosphodiesterase 1
Gene Aliases
C16orf57, HVSL1, Mpn1, PN, hUsb1
Chromosome Location
Chr.16: 57999600 - 58021623 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001204911.1 NP_001191840.1 4 - 4 1457 72
GenBank mRNA AK124443.1 - 1 - 1 1251 72
BF733890.1 - 1 - 1 72


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BI020791.1 - 1 Chr. 16 - 58011837 - 58012193 [-] on Build GRCh38 72
GenBankmRNA BG949738.1 - 1 194 Chr. 16 - 58011734 - 58011990 [+] on Build GRCh38 72


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream zinc finger protein 319 ZNF319 ZFP319 -10.0kb Anti-sense Chr. - 57994668 - 58000691 on Build GRCh38
Downstream matrix metallopeptidase 15 MMP15 MMP-15, MT2-MMP, MT2MMP, MTMMP2, SMCP-2 11.8kb Sense Chr. - 58025566 - 58046901 on Build GRCh38

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