Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CDK13
Entrez Gene ID
8621
Gene Name
cyclin dependent kinase 13
Gene Aliases
CDC2L, CDC2L5, CHED, hCDK13
Chromosome Location
Chr.7: 39949501 - 40097134 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_003718.4 NP_003709.3 14 - 14 6248 88
NM_031267.3 NP_112557.2 14 - 14 6068 88
XM_017012750.1 XP_016868239.1 15 - 15 7197 88
XM_017012751.1 XP_016868240.1 15 - 15 7017 88
GenBank mRNA AK130653.1 - 1 - 1 442 88
BM727913.1 - 1 - 1 333 88


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DN913027.1 - 1 274 Chr. 7 - 40096134 - 40096792 [+] on Build GRCh38 88
GenBankmRNA DN916349.1 - 1 274 Chr. 7 - 40096134 - 40096701 [+] on Build GRCh38 88
GenBankmRNA BU567923.1 - 1 445 Chr. 7 - 40095963 - 40096760 [+] on Build GRCh38 88
GenBankmRNA CB161537.1 - 1 96 Chr. 7 - 40096312 - 40096896 [+] on Build GRCh38 88
GenBankmRNA BU561639.1 - 1 270 Chr. 7 - 40096138 - 40096864 [+] on Build GRCh38 88


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream long intergenic non-protein coding RNA 265 LINC00265 NCRNA00265 -301.3kb Sense Chr. - 39733568 - 39794623 on Build GRCh38
Downstream M-phase specific PLK1 interacting protein MPLKIP ABHS, C7orf11, ORF20, TTD4 35.6kb Anti-sense Chr. - 40132743 - 40134652 on Build GRCh38

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