Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
PARVA
Entrez Gene ID
55742
Gene Name
parvin alpha
Gene Aliases
CH-ILKBP, MXRA2
Chromosome Location
Chr.11: 12376441 - 12535356 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_018222.4 NP_060692.2 13 - 13 7797 77
XM_005253015.3 XP_005253072.1 13 - 13 7786 77
GenBank mRNA AK128814.1 - 1 - 1 1149 77


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BU177334.1 - 1 449 Chr. 11 - 12534050 - 12534826 [+] on Build GRCh38 77
GenBankmRNA AI096946.1 - 1 Chr. 11 - 12534182 - 12534537 [-] on Build GRCh38 77
GenBankmRNA AA613735.1 - 1 Chr. 11 - 12534065 - 12534535 [-] on Build GRCh38 77
GenBankmRNA BG681472.1 - 1 176 Chr. 11 - 12534259 - 12535137 [+] on Build GRCh38 77
GenBankmRNA AL135339.1 - 1 286 Chr. 11 - 12534149 - 12534537 [+] on Build GRCh38 77
GenBankmRNA AA468850.1 - 1 Chr. 11 - 12534245 - 12534531 [-] on Build GRCh38 77
GenBankmRNA AW973869.1 - 1 Chr. 11 - 12534022 - 12534533 [-] on Build GRCh38 77
GenBankmRNA AW138886.1 - 1 Chr. 11 - 12533842 - 12534537 [-] on Build GRCh38 77
GenBankmRNA BU171787.1 - 570 Chr. - - [-] on Build 77
GenBankmRNA AI871180.1 - 1 Chr. 11 - 12534173 - 12534537 [-] on Build GRCh38 77
GenBankmRNA BG742464.1 - 1 266 Chr. 11 - 12534169 - 12535066 [+] on Build GRCh38 77


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream MICAL C-terminal like MICALCL Ebitein1 -174.1kb Sense Chr. - 12286900 - 12359144 on Build GRCh38
Downstream TEA domain transcription factor 1 TEAD1 AA, NTEF-1, REF1, TCF-13, TCF13, TEAD-1, TEF-1 139.1kb Sense Chr. - 12674422 - 12944737 on Build GRCh38

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