Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
POLR2J2
Entrez Gene ID
246721
Gene Name
RNA polymerase II subunit J2
Gene Aliases
HRPB11B, RPB11b1
Chromosome Location
Chr.7: 102636748 - 102671729 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_032959.5 NP_116581.3 5 - 6 688 99
GenBank mRNA BC056864.1 - 5 - 6 578 99
BC086857.1 - 4 - 5 513 99

Gene Symbol
LOC107983993
Entrez Gene ID
107983993
Gene Name
uroplakin-3b-like protein
Gene Aliases
-
Chromosome Location
Chr.7: 102537919 - 102544881 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_017012895.1 XP_016868384.1 3 - 4 407 99
XM_017012896.1 XP_016868385.1 3 - 4 930 99

Gene Symbol
POLR2J3
Entrez Gene ID
548644
Gene Name
RNA polymerase II subunit J3
Gene Aliases
POLR2J2, RPB11b1, RPB11b2
Chromosome Location
Chr.7: 102537919 - 102572660 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001097615.2 NP_001091084.2 5 - 6 660 99
XM_017012373.1 XP_016867862.1 6 - 7 854 99
GenBank mRNA BC113031.1 - 2 - 3 717 99
DA574442.1 - 4 - 5 448 99

Gene Symbol
POLR2J4
Entrez Gene ID
84820
Gene Name
RNA polymerase II subunit J4, pseudogene
Gene Aliases
RPB11-phi
Chromosome Location
Chr.7: 43940895 - 44019194 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_003655.3 5 - 6 647 99
GenBank mRNA AK296066.1 - 4 - 5 450 99
BX537878.1 - 5 - 6 602 99
CD674494.1 - 3 - 4 344 99

Gene Symbol
UPK3BL
Entrez Gene ID
100134938
Gene Name
uroplakin 3B-like
Gene Aliases
UPLP
Chromosome Location
Chr.7: 102637025 - 102642791 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001114403.2 NP_001107875.1 2 - 3 320 99
GenBank mRNA EU341824.1 - 2 - 3 320 99
KF150200.1 - 2 - 3 287 99

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