Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
MAVS
Entrez Gene ID
57506
Gene Name
mitochondrial antiviral signaling protein
Gene Aliases
CARDIF, IPS-1, IPS1, VISA
Chromosome Location
Chr.20: 3846799 - 3876123 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001206491.1 NP_001193420.1 2 - 3 290 82
GenBank mRNA AK291785.1 - 2 - 3 249 82
BX649084.1 - 2 - 3 251 82
EF467323.1 - 1 - 2 118 82


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA DA863840.1 - 2 - 3 249 Chr. 20 - 3846840 - 3862407 [+] on Build GRCh38 82
GenBankmRNA DA384852.1 - 1 - 2 95 Chr. 20 - 3854648 - 3864387 [+] on Build GRCh38 82
GenBankmRNA DA454540.1 - 2 - 3 252 Chr. 20 - 3846837 - 3862414 [+] on Build GRCh38 82
GenBankmRNA DA253104.1 - 2 - 3 255 Chr. 20 - 3846834 - 3862400 [+] on Build GRCh38 82
GenBankmRNA DB140198.1 - 2 - 3 252 Chr. 20 - 3846837 - 3862366 [+] on Build GRCh38 82


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream adaptor related protein complex 5 sigma 1 subunit AP5S1 C20orf29 -29.3kb Sense Chr. - 3820524 - 3825307 on Build GRCh38
Downstream pantothenate kinase 2 PANK2 C20orf48, HARP, HSS, NBIA1, PKAN 27.3kb Sense Chr. - 3888839 - 3929882 on Build GRCh38

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