Assay Design

The amplified product spans an exon junction and the probe and one of the primers sit within one exon. This assay may detect gDNA.

Gene Transcripts

Gene Symbol
Gm4836
Entrez Gene ID
22526
Gene Name
predicted gene 4836
Gene Aliases
-
Chromosome Location
Chr.X: 28270710 - 28293632 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_009529.3 NP_033555.1 3 - 3 269 162
GenBank mRNA BC061169.1 - 3 - 3 269 162

Gene Symbol
Gm10058
Entrez Gene ID
100039240
Gene Name
predicted gene 10058
Gene Aliases
ENSMUSG00000059047
Chromosome Location
Chr.X: 27924021 - 27946885 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001109969.2 NP_001103439.1 3 - 3 238 162
GenBank mRNA BU936093.1 - - 241 162

Gene Symbol
Gm10096
Entrez Gene ID
100039377
Gene Name
predicted gene 10096
Gene Aliases
ENSMUSG00000061227, Xmr-like
Chromosome Location
Chr.X: 28931807 - 28954702 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001102678.2 NP_001096148.1 3 - 3 269 162

Gene Symbol
Gm10147
Entrez Gene ID
100039324
Gene Name
predicted gene 10147
Gene Aliases
ENSMUSG00000064334
Chromosome Location
Chr.X: 28584995 - 28607874 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001099919.2 NP_001093389.1 - 241 162

Gene Symbol
Gm10230
Entrez Gene ID
100042175
Gene Name
predicted gene 10230
Gene Aliases
ENSMUSG00000068103
Chromosome Location
Chr.X: 27472033 - 27494914 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001099347.2 NP_001092817.1 3 - 3 238 162

Gene Symbol
Gm10486
Entrez Gene ID
100039550
Gene Name
predicted gene 10486
Gene Aliases
ENSMUSG00000073247
Chromosome Location
Chr.X: 35067384 - 35090316 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001109970.1 NP_001103440.1 3 - 3 269 162
GenBank mRNA BC087930.1 - - 238 162
BC099540.1 - 3 - 3 209 162
X72697.1 - - 256 162

Gene Symbol
Gm10487
Entrez Gene ID
100039467
Gene Name
predicted gene 10487
Gene Aliases
ENSMUSG00000073253
Chromosome Location
Chr.X: 30820542 - 30843469 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001100609.1 NP_001094079.1 3 - 3 269 162

Gene Symbol
Gm10488
Entrez Gene ID
100042109
Gene Name
predicted gene 10488
Gene Aliases
ENSMUSG00000073257
Chromosome Location
Chr.X: 29976314 - 29999162 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001099325.2 NP_001092795.1 3 - 3 238 162
GenBank mRNA BC099541.1 - 3 - 3 238 162

Gene Symbol
Gm14525
Entrez Gene ID
100039120
Gene Name
predicted gene 14525
Gene Aliases
OTTMUSG00000017011
Chromosome Location
Chr.X: 26672780 - 26702638 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001162364.2 NP_001155836.1 3 - 3 238 162
GenBank mRNA BC048742.1 - 3 - 3 238 162

Gene Symbol
Gm14632
Entrez Gene ID
100042144
Gene Name
predicted gene 14632
Gene Aliases
OTTMUSG00000017531
Chromosome Location
Chr.X: 30329715 - 30352646 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001100610.2 NP_001094080.1 3 - 3 238 162

Gene Symbol
Gm14819
Entrez Gene ID
100039585
Gene Name
predicted gene 14819
Gene Aliases
OTTMUSG00000018086
Chromosome Location
Chr.X: 35404215 - 35427094 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001110250.2 NP_001103720.1 - 238 162

Gene Symbol
Gm1993
Entrez Gene ID
100038977
Gene Name
predicted gene 1993
Gene Aliases
-
Chromosome Location
Chr.X: 25548501 - 25570449 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001102677.2 NP_001096147.1 3 - 3 269 162

Gene Symbol
Gm2030
Entrez Gene ID
100039065
Gene Name
predicted gene 2030
Gene Aliases
-
Chromosome Location
Chr.X: 26287199 - 26310044 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001100445.2 NP_001093915.1 3 - 3 269 162

Gene Symbol
Gm5168
Entrez Gene ID
382275
Gene Name
predicted gene 5168
Gene Aliases
EG382275
Chromosome Location
Chr.X: 26028214 - 26051041 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001025607.3 NP_001020778.1 3 - 3 188 162
GenBank mRNA BC099542.1 - 3 - 3 188 162

Gene Symbol
Gm5934
Entrez Gene ID
546272
Gene Name
predicted gene 5934
Gene Aliases
EG546272
Chromosome Location
Chr.X: 24474308 - 24499163 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001100444.2 NP_001093914.1 2 - 2 132 162

Gene Symbol
Gm5935
Entrez Gene ID
546282
Gene Name
predicted gene 5935
Gene Aliases
EG546282
Chromosome Location
Chr.X: 24753162 - 24775164 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001081657.1 NP_001075126.1 3 - 3 238 162
GenBank mRNA BC100411.1 - 3 - 3 238 162

Gene Symbol
Gm6121
Entrez Gene ID
619991
Gene Name
predicted gene 6121
Gene Aliases
-
Chromosome Location
Chr.X: 26912743 - 26935669 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001114754.1 NP_001108226.1 3 - 3 238 162

Gene Symbol
Slx
Entrez Gene ID
664829
Gene Name
Sycp3 like X-linked
Gene Aliases
EG664958, Xmr
Chromosome Location
Chr.X: 26522657 - 26545565 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_001136476.1 NP_001129948.1 3 - 3 269 162

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