Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
2410006H16Rik
Entrez Gene ID
69221
Gene Name
RIKEN cDNA 2410006H16 gene
Gene Aliases
-
Chromosome Location
Chr.11: 62602877 - 62604806 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_030738.1 2 - 3 191 70
GenBank mRNA AK010427.1 - 2 - 3 192 70
AK157519.1 - 2 - 3 192 70


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CF612138.1 - 2 - 3 162 Chr. 11 - 62602943 - 62604809 [+] on Build GRCm38 70
GenBankmRNA W62980.1 - 194 Chr. - - [-] on Build 70
GenBankmRNA W07913.1 - 46 Chr. - - [-] on Build 70
GenBankmRNA CK795379.1 - 2 - 3 181 Chr. 11 - 62602901 - 62604809 [+] on Build GRCm38 70
GenBankmRNA AV478545.1 - 2 - 3 167 Chr. 11 - 62602901 - 62604804 [+] on Build GRCm38 70
GenBankmRNA AA087133.1 - 2 - 3 163 Chr. 11 - 62602903 - 62604801 [+] on Build GRCm38 70
GenBankmRNA CA490873.1 - 228 Chr. - - [-] on Build 70
GenBankmRNA AV490079.1 - 2 - 3 164 Chr. 11 - 62602903 - 62604796 [+] on Build GRCm38 70
GenBankmRNA DV066609.1 - 214 Chr. - - [-] on Build 70
GenBankmRNA AV483941.1 - 2 - 3 175 Chr. 11 - 62602892 - 62604784 [+] on Build GRCm38 70
GenBankmRNA W30208.1 - 172 Chr. - - [-] on Build 70
GenBankmRNA AA939619.1 - 2 - 3 118 Chr. 11 - 62602948 - 62604804 [+] on Build GRCm38 70
GenBankmRNA CV677284.1 - 3 - 4 Chr. 11 - 62603241 - 62604774 [-] on Build GRCm38 70
GenBankmRNA AW047072.1 - 3 - 4 Chr. 11 - 62603244 - 62604809 [-] on Build GRCm38 70
GenBankmRNA BX513638.1 - 2 - 3 170 Chr. 11 - 62602898 - 62604809 [+] on Build GRCm38 70
GenBankmRNA AV576844.1 - 2 - 3 166 Chr. 11 - 62602902 - 62604804 [+] on Build GRCm38 70
GenBankmRNA AA644831.1 - 2 - 3 178 Chr. 11 - 62602896 - 62603637 [+] on Build GRCm38 70
GenBankmRNA BY471947.1 - 2 - 3 190 Chr. 11 - 62602877 - 62604801 [+] on Build GRCm38 70
GenBankmRNA AV466974.1 - 2 - 3 179 Chr. 11 - 62602889 - 62604676 [+] on Build GRCm38 70
GenBankmRNA AV459516.1 - 2 - 3 179 Chr. 11 - 62602892 - 62604809 [+] on Build GRCm38 70
GenBankmRNA BY123523.1 - 2 - 3 188 Chr. 11 - 62602880 - 62604681 [+] on Build GRCm38 70
GenBankmRNA BY023329.1 - 2 - 3 188 Chr. 11 - 62602880 - 62604719 [+] on Build GRCm38 70
GenBankmRNA AV492656.1 - 2 - 3 169 Chr. 11 - 62602900 - 62604809 [+] on Build GRCm38 70
GenBankmRNA BY118814.1 - 2 - 3 188 Chr. 11 - 62602880 - 62604673 [+] on Build GRCm38 70
GenBankmRNA AA052212.1 - 2 - 3 157 Chr. 11 - 62602910 - 62604745 [+] on Build GRCm38 70
GenBankmRNA W34684.1 - 166 Chr. - - [-] on Build 70
GenBankmRNA BY405332.1 - 2 - 3 133 Chr. 11 - 62602936 - 62604806 [+] on Build GRCm38 70
GenBankmRNA BY332380.1 - 2 - 3 188 Chr. 11 - 62602880 - 62604672 [+] on Build GRCm38 70
GenBankmRNA AV500889.1 - 2 - 3 70 Chr. 11 - 62602998 - 62604778 [+] on Build GRCm38 70
GenBankmRNA CJ176622.1 - 2 - 3 188 Chr. 11 - 62602880 - 62604778 [+] on Build GRCm38 70
GenBankmRNA BE647248.1 - 2 - 3 62 Chr. 11 - 62603006 - 62604809 [+] on Build GRCm38 70
GenBankmRNA W29476.1 - 175 Chr. - - [-] on Build 70
GenBankmRNA BY048877.1 - 2 - 3 188 Chr. 11 - 62602880 - 62604470 [+] on Build GRCm38 70
GenBankmRNA AV491046.1 - 2 - 3 180 Chr. 11 - 62602890 - 62604777 [+] on Build GRCm38 70
GenBankmRNA AI060452.1 - 2 - 3 177 Chr. 11 - 62602891 - 62604782 [+] on Build GRCm38 70
GenBankmRNA BY056642.1 - 2 - 3 187 Chr. 11 - 62602880 - 62604467 [+] on Build GRCm38 70
GenBankmRNA AV508300.1 - 2 - 3 175 Chr. 11 - 62602893 - 62604804 [+] on Build GRCm38 70
GenBankmRNA BY709861.1 - 2 - 3 187 Chr. 11 - 62602884 - 62604806 [+] on Build GRCm38 70
GenBankmRNA DV054738.1 - 212 Chr. - - [-] on Build 70
GenBankmRNA CF587018.1 - 1 - 2 50 Chr. 11 - 62603241 - 62604809 [+] on Build GRCm38 70
GenBankmRNA AA038258.1 - 2 - 3 166 Chr. 11 - 62602902 - 62604457 [+] on Build GRCm38 70
GenBankmRNA BE138252.1 - 2 - 3 184 Chr. 11 - 62602895 - 62604782 [+] on Build GRCm38 70


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream small nucleolar RNA, C/D box 49A Snord49a MBII-243 Sense Chr. - 62603460 - 62603521 on Build GRCm38
Downstream small nucleolar RNA, C/D box 65 Snord65 MBII-135, snoRNA135 884.0 Sense Chr. - 62604530 - 62604586 on Build GRCm38

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