Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
C1galt1
Entrez Gene ID
94192
Gene Name
core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1
Gene Aliases
2210410E06Rik, AV284120, T-synthase
Chromosome Location
Chr.6: 7845224 - 7872042 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA AK008884.1 - - 553 89


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AA212612.1 - 1 455 Chr. 6 - 7874368 - 7874870 [+] on Build GRCm38 89
GenBankmRNA BI664532.1 - 1 101 Chr. 6 - 7874724 - 7875487 [+] on Build GRCm38 90
GenBankmRNA BE307566.1 - 1 367 Chr. 6 - 7874456 - 7874935 [+] on Build GRCm38 89
GenBankmRNA AA839256.1 - 1 276 Chr. 6 - 7874547 - 7874910 [+] on Build GRCm38 89
GenBankmRNA AA645874.1 - 1 301 Chr. 6 - 7874522 - 7874930 [+] on Build GRCm38 89
GenBankmRNA CB204101.1 - 1 331 Chr. 6 - 7874514 - 7875347 [+] on Build GRCm38 89
GenBankmRNA CD770396.1 - 1 397 Chr. 6 - 7874427 - 7875061 [+] on Build GRCm38 89
GenBankmRNA AA866875.1 - 1 259 Chr. 6 - 7874564 - 7874977 [+] on Build GRCm38 89
GenBankmRNA CF911761.1 - 1 585 Chr. 6 - 7874238 - 7874887 [+] on Build GRCm38 89


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Downstream collagen, type XXVIII, alpha 1 Col28a1 Col28, Gm466 121.8kb Anti-sense Chr. - 7997100 - 8194223 on Build GRCm38

View Full Product Details