Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- Sptlc2
- Entrez Gene ID
-
20773
- Gene Name
- serine palmitoyltransferase, long chain base subunit 2
- Gene Aliases
-
AI173915, LCB2, mKIAA0526
- Chromosome Location
-
Chr.12: 87307889 - 87388230 on Build GRCm38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| GenBank mRNA |
AK037908.1 |
- |
- |
3853 |
95 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BB114630.2 |
- |
1 |
244 |
|
Chr. 12 - 87305112 - 87305807 [-] on Build GRCm38 |
95 |
| GenBankmRNA |
AI552127.1 |
- |
1 |
133 |
|
Chr. 12 - 87305255 - 87305702 [-] on Build GRCm38 |
95 |
| GenBankmRNA |
AA106969.1 |
- |
1 |
132 |
|
Chr. 12 - 87305267 - 87305701 [-] on Build GRCm38 |
95 |
| GenBankmRNA |
BB794710.1 |
- |
1 |
177 |
|
Chr. 12 - 87305059 - 87305748 [-] on Build GRCm38 |
95 |
| GenBankmRNA |
CB209280.1 |
- |
1 |
408 |
|
Chr. 12 - 87305148 - 87305977 [-] on Build GRCm38 |
95 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
isthmin 2 homolog (zebrafish) |
Ism2 |
Gm264, Thsd3 |
-4.8kb
|
Sense |
Chr. - 87278638 - 87300346 on Build GRCm38 |
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