Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
Tbc1d16
Entrez Gene ID
207592
Gene Name
TBC1 domain family, member 16
Gene Aliases
B930087K01, BC026530, Tcd1d16
Chromosome Location
Chr.11: 119143043 - 119228499 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_172443.3 NP_766031.2 12 - 12 6409 86
GenBank mRNA AK165823.1 - 1 - 1 2226 86
BC026530.1 - 1 - 1 1050 86


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BU058089.1 - 1 310 Chr. 11 - 119143221 - 119143931 [-] on Build GRCm38 86
GenBankmRNA BI988712.1 - 1 448 Chr. 11 - 119143470 - 119144069 [-] on Build GRCm38 86
GenBankmRNA BQ178352.1 - 1 301 Chr. 11 - 119143159 - 119143922 [-] on Build GRCm38 86
GenBankmRNA BI218684.1 - 1 184 Chr. 11 - 119143041 - 119143794 [-] on Build GRCm38 86
GenBankmRNA CN531439.1 - 1 Chr. 11 - 119143376 - 119143936 [+] on Build GRCm38 86
GenBankmRNA W96973.1 - 186 Chr. - - [-] on Build 86
GenBankmRNA CB566529.1 - 1 555 Chr. 11 - 119143343 - 119144175 [-] on Build GRCm38 86
GenBankmRNA BF302315.1 - 1 213 Chr. 11 - 119143068 - 119143834 [-] on Build GRCm38 86
GenBankmRNA CK638032.1 - 1 567 Chr. 11 - 119143460 - 119144188 [-] on Build GRCm38 86
GenBankmRNA CF727767.1 - 1 385 Chr. 11 - 119143221 - 119144006 [-] on Build GRCm38 86
GenBankmRNA CB526394.1 - 1 281 Chr. 11 - 119143274 - 119143902 [-] on Build GRCm38 86
GenBankmRNA AA231614.1 - 1 423 Chr. 11 - 119143529 - 119144033 [-] on Build GRCm38 86
GenBankmRNA CN538814.1 - 1 334 Chr. 11 - 119143167 - 119143955 [-] on Build GRCm38 86
GenBankmRNA CK128488.1 - 1 240 Chr. 11 - 119143093 - 119143861 [-] on Build GRCm38 86


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream predicted gene 11754 Gm11754 OTTMUSG00000004003 -31.6kb Sense Chr. - 119105130 - 119111450 on Build GRCm38
Downstream microRNA 6934 Mir6934 Gm27523, mmu-mir-6934 9.4kb Sense Chr. - 119154076 - 119154137 on Build GRCm38

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