Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- Snord55
- Entrez Gene ID
-
100216533
- Gene Name
- small nucleolar RNA, C/D box 55
- Gene Aliases
-
-
- Chromosome Location
-
Chr.4: 117155771 - 117155848 on Build GRCm38
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
| RefSeq |
NR_030704.1 |
|
1 - 1 |
34 |
71 |
| GenBank mRNA |
X97586.1 |
- |
1 - 1 |
34 |
71 |
Non Gene Transcripts
| Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
| GenBankmRNA |
BM730692.1 |
- |
1 |
59 |
|
Chr. 4 - 117155394 - 117155873 [-] on Build GRCm38 |
71 |
| GenBankmRNA |
BF463253.1 |
- |
1 |
97 |
|
Chr. 4 - 117155616 - 117155911 [-] on Build GRCm38 |
71 |
| GenBankmRNA |
BM730772.1 |
- |
1 |
59 |
|
Chr. 4 - 117155425 - 117155873 [-] on Build GRCm38 |
71 |
| GenBankmRNA |
AV479781.1 |
- |
1 |
69 |
|
Chr. 4 - 117155006 - 117155879 [-] on Build GRCm38 |
71 |
| GenBankmRNA |
CF622782.1 |
- |
1 |
48 |
|
Chr. 4 - 117155311 - 117155862 [-] on Build GRCm38 |
71 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
| Upstream |
small nucleolar RNA, C/D box 38A |
Snord38a |
MBII-329 |
-1.2kb
|
Sense |
Chr. - 117154516 - 117154574 on Build GRCm38 |
| Downstream |
kinesin family member 2C |
Kif2c |
4930402F02Rik, ESTM5, Knsl6, MCAK, X83316 |
3.8kb
|
Sense |
Chr. - 117159633 - 117182624 on Build GRCm38 |
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