Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
E4f1
Entrez Gene ID
13560
Gene Name
E4F transcription factor 1
Gene Aliases
p120E4F, phi-AP3
Chromosome Location
Chr.17: 24443778 - 24455590 on Build GRCm38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
GenBank mRNA AF126967.1 - 6 - 7 901 59
AK033285.1 - 6 - 7 913 59
AK077014.1 - - 962 59
AK144176.1 - 6 - 7 858 59
BC005634.1 - 6 - 7 832 59
BC031757.1 - 5 - 6 1042 59
BC046459.1 - 6 - 7 971 59
BC057011.1 - 5 - 6 564 59
BC071228.1 - 6 - 7 914 59
X76858.1 - 5 - 6 697 59


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA CO425601.1 - 3 - 4 381 Chr. 17 - 24445984 - 24447401 [-] on Build GRCm38 59
GenBankmRNA BM947613.1 - 5 - 6 563 Chr. 17 - 24446567 - 24451479 [-] on Build GRCm38 59
GenBankmRNA BQ178864.1 - 3 - 4 381 Chr. 17 - 24446011 - 24447401 [-] on Build GRCm38 59
GenBankmRNA DV648753.1 - 3 - 4 356 Chr. 17 - 24446001 - 24447376 [-] on Build GRCm38 59
GenBankmRNA BG975422.1 - 2 - 3 204 Chr. 17 - 24445465 - 24447137 [-] on Build GRCm38 59
GenBankmRNA CA528677.1 - 3 - 4 335 Chr. 17 - 24446057 - 24447355 [-] on Build GRCm38 59
GenBankmRNA BQ442418.1 - 1 - 2 135 Chr. 17 - 24445174 - 24446914 [-] on Build GRCm38 59


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream deoxyribonuclease 1-like 2 Dnase1l2 4733401H14Rik -2.7kb Sense Chr. - 24440087 - 24443765 on Build GRCm38
Downstream RIKEN cDNA 4833447I15 gene 4833447I15Rik 14.3kb Sense Chr. - 24461220 - 24470191 on Build GRCm38

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