Product Details

SNP ID

rs619054

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:116790097 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

TCAGAGCCAAGGCTCCCCAGACAAG[A/G]AGCTGGGAATGGGCCTGGGCAGGTA

Phenotype

MIM: 606368 MIM: 603901

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

APOA5 PubMed Links

Additional Information

For this assay, SNP(s) [rs34089864] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

APOA5

Gene Name

apolipoprotein A5

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001166598.1	1205	UTR 3			NP_001160070.1
NM_052968.4	1205	UTR 3			NP_443200.2
XM_017017169.1	1205	UTR 3			XP_016872658.1

Gene

ZPR1

Gene Name

ZPR1 zinc finger

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001317086.1	1205	Intron			NP_001304015.1
NM_003904.4	1205	Intron			NP_003895.1

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