Assay Design

The assay probe spans an exon junction. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: EcR
Entrez Gene ID: 35540
Gene Name: Ecdysone receptor
Gene Aliases: CG1765, CG8347, DEcR, Dhr23, DmEcR, Dmel\CG1765, Dmel_CG1765, ECR, ECR-C, EcR-A, EcR-B, EcR-B1, EcR1b, EcRA, EcRB, EcRB-1, EcRB1, EcRC, EcdR, Ecr, Ecr1B, EcrB1, NR1H1, USP, Usp, anon-WO0229075.1, dECR, dmEcR, ecr, lie, ms(2)06410, ms(2)42A, snt
Chromosome Location: Chr.2R: 6087873 - 6169087 on Build Release_6_plus_ISO1_MT
Species Specific ID (Flybase ID): FBgn0000546

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001169590.2	NP_001163061.1	4 - 5	2401	65
	NM_165461.3	NP_724456.1	5 - 6	1640	65
	NM_165462.2	NP_724457.1	6 - 7	1719	65
	NM_165463.2	NP_724458.1	6 - 7	1765	65
	NM_165464.3	NP_724459.1	3 - 4	1516	65
	NM_165465.3	NP_724460.1	4 - 5	2482	65
GenBank mRNA	BT012469.1	-	4 - 5	2478	65
	BT015234.1	-	4 - 5	2477	65
	M74078.1	-	4 - 5	2406	65