Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 5 - 6 571 60
NM_001286402.1 NP_001273331.1 5 - 6 574 60
NM_001286403.1 NP_001273332.1 5 - 6 571 60
NR_104444.1 5 - 6 571 60
XM_006720880.3 XP_006720943.2 5 - 6 752 60
XM_011522484.2 XP_011520786.1 5 - 6 752 60
XM_011522485.2 XP_011520787.1 5 - 6 752 60
XM_011522486.2 XP_011520788.1 5 - 6 754 60
XM_011522487.2 XP_011520789.1 5 - 6 636 60
XM_011522488.2 XP_011520790.1 5 - 6 1983 60
XM_011522489.2 XP_011520791.1 5 - 6 633 60
XM_011522490.2 XP_011520792.1 5 - 6 1981 60
XM_011522491.2 XP_011520793.1 5 - 6 754 60
XM_011522492.2 XP_011520794.1 5 - 6 700 60
XM_011522493.2 XP_011520795.1 5 - 6 697 60
XM_011522494.2 XP_011520796.1 5 - 6 464 60
XM_011522495.2 XP_011520797.1 5 - 6 702 60
XM_011522496.2 XP_011520798.1 5 - 6 699 60
GenBank mRNA AF410154.1 - 5 - 6 576 60
AY084055.1 - 5 - 6 561 60
AY699071.1 - 4 - 5 369 60
U18259.1 - 5 - 6 576 60
U18288.1 - 5 - 6 556 60
U31931.1 - 5 - 6 438 60
X74301.1 - 5 - 6 553 60

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