Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
Chromosome Location
Chr.16: 10866208 - 10941562 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NM_000246.3 NP_000237.2 12 - 13 2951 60
NM_001286402.1 NP_001273331.1 12 - 13 2954 60
NM_001286403.1 NP_001273332.1 10 - 11 1199 60
XM_006720880.3 XP_006720943.2 12 - 13 3132 60
XM_011522484.2 XP_011520786.1 12 - 13 3132 60
XM_011522485.2 XP_011520787.1 12 - 13 3132 60
XM_011522486.2 XP_011520788.1 12 - 13 3134 60
XM_011522487.2 XP_011520789.1 11 - 12 2869 60
XM_011522488.2 XP_011520790.1 12 - 13 4363 60
XM_011522489.2 XP_011520791.1 11 - 12 2866 60
XM_011522490.2 XP_011520792.1 12 - 13 4361 60
XM_011522491.2 XP_011520793.1 12 - 13 3134 60
XM_011522492.2 XP_011520794.1 12 - 13 3080 60
XM_011522493.2 XP_011520795.1 12 - 13 3077 60
XM_011522494.2 XP_011520796.1 12 - 13 2844 60
XM_011522495.2 XP_011520797.1 11 - 12 2935 60
XM_011522496.2 XP_011520798.1 11 - 12 2932 60
GenBank mRNA AF410154.1 - 12 - 13 3832 60
AY084054.1 - 10 - 11 1189 60
AY699071.1 - 11 - 12 2749 60
U18259.1 - 12 - 13 2956 60
X74301.1 - 12 - 13 2933 60

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