Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol
PPP4R1L
Entrez Gene ID
55370
Gene Name
protein phosphatase 4 regulatory subunit 1 like (pseudogene)
Gene Aliases
C20orf192, PPP4R1P1, PRO1085
Chromosome Location
Chr.20: 58232777 - 58309439 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_003505.3 6 - 7 487 77
GenBank mRNA AK057583.1 - 6 - 7 487 77
AK299330.1 - 6 - 7 624 77
AL833409.1 - 4 - 5 381 77
BC100979.1 - 7 - 8 630 77
BC100980.1 - 7 - 8 630 77


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA BX422703.2 - 6 - 7 611 Chr. 20 - 58246221 - 58309264 [-] on Build GRCh38 77
GenBankmRNA BM544935.1 - 4 - 5 372 Chr. 20 - 58245847 - 58286377 [-] on Build GRCh38 77
GenBankmRNA AL731927.1 - 3 - 4 300 Chr. 20 - 58248146 - 58271477 [-] on Build GRCh38 77
GenBankmRNA BM842626.1 - 4 - 5 451 Chr. 20 - 58248112 - 58272875 [-] on Build GRCh38 77
GenBankmRNA CN369427.1 - 5 - 6 540 Chr. 20 - 58248226 - 58286422 [-] on Build GRCh38 77
GenBankmRNA DC428900.1 - 4 - 5 390 Chr. 20 - 58247458 - 58272834 [-] on Build GRCh38 77
GenBankmRNA CN369428.1 - 5 - 6 560 Chr. 20 - 58248171 - 58286442 [-] on Build GRCh38 77
GenBankmRNA DB067324.1 - 3 - 4 273 Chr. 20 - 58247385 - 58271453 [-] on Build GRCh38 77
GenBankmRNA DB101173.1 - 6 - 7 487 Chr. 20 - 58248221 - 58309439 [-] on Build GRCh38 77
GenBankmRNA AL731928.1 - 1 - 2 Chr. 20 - 58248161 - 58271477 [+] on Build GRCh38 77


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream ankyrin repeat domain 60 ANKRD60 C20orf86, bA196N14.3 -19.5kb Sense Chr. - 58216126 - 58228653 on Build GRCh38
Downstream RAB22A, member RAS oncogene family RAB22A 58.8kb Anti-sense Chr. - 58309715 - 58367507 on Build GRCh38

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