Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
CCDC82
Entrez Gene ID
79780
Gene Name
coiled-coil domain containing 82
Gene Aliases
HSPC048
Chromosome Location
Chr.11: 96352765 - 96389940 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq XM_011542984.2 XP_011541286.1 1 - 1 226 65
XM_017018305.1 XP_016873794.1 1 - 1 226 65
XM_017018306.1 XP_016873795.1 1 - 1 226 65
XM_017018308.1 XP_016873797.1 1 - 1 226 65
XM_017018311.1 XP_016873800.1 1 - 1 226 65
XM_017018312.1 XP_016873801.1 1 - 1 226 65
GenBank mRNA AF161533.1 - 1 - 1 658 65


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AF150137.1 - 1 658 Chr. 11 - 96389159 - 96389865 [-] on Build GRCh38 65
GenBankmRNA DA249227.1 - 1 226 Chr. 11 - 96388833 - 96389434 [-] on Build GRCh38 65


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream mastermind like transcriptional coactivator 2 MAML2 MAM-3, MAM2, MAM3, MLL-MAML2 -45.5kb Sense Chr. - 95976593 - 96343245 on Build GRCh38
Downstream JRK-like JRKL HHMJG 560.0 Anti-sense Chr. - 96389994 - 96393563 on Build GRCh38

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