Product Details

SNP ID

rs202076454

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:72577554 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGCTCACGGTTGGAGGCCACGCGCT[C/T]GTACAGCTCTGCCGCTTTGGGGAAC

Phenotype

MIM: 602658

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

LINC01537 PubMed Links

Additional Information

For this assay, SNP(s) [rs1980091] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

LINC01537

Gene Name

long intergenic non-protein coding RNA 1537

There are no transcripts associated with this gene.

Gene

PDE2A

Gene Name

phosphodiesterase 2A

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001143839.3	3135	Missense Mutation	AAG,GAG	K879E	NP_001137311.1
NM_001146209.2	3135	Missense Mutation	AAG,GAG	K877E	NP_001139681.1
NM_001243784.1	3135	Missense Mutation	AAG,GAG	K865E	NP_001230713.1
NM_002599.4	3135	Missense Mutation	AAG,GAG	K886E	NP_002590.1
XM_005274040.2	3135	Missense Mutation	AAG,GAG	K885E	XP_005274097.1
XM_011545096.2	3135	Missense Mutation	AAG,GAG	K565E	XP_011543398.1
XM_017017910.1	3135	Missense Mutation	AAG,GAG	K565E	XP_016873399.1

View Full Product Details