Product Details

SNP ID

rs34673412

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:20169618 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CGCTTTCATTGGTTGGTCAAAAATA[C/T]GCAAAAACCCTAAATATTCACACAT

Phenotype

MIM: 609168

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

SGO1 PubMed Links

Additional Information

For this assay, SNP(s) [rs112048159] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

SGO1

Gene Name

shugoshin 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001012409.3	2963	UTR 3			NP_001012409.1
NM_001012410.4	2963	Intron			NP_001012410.1
NM_001012411.3	2963	UTR 3			NP_001012411.1
NM_001012412.4	2963	Intron			NP_001012412.1
NM_001012413.3	2963	UTR 3			NP_001012413.1
NM_001199251.2	2963	UTR 3			NP_001186180.1
NM_001199252.2	2963	Intron			NP_001186181.1
NM_001199253.2	2963	UTR 3			NP_001186182.1
NM_001199254.2	2963	Intron			NP_001186183.1
NM_001199255.2	2963	UTR 3			NP_001186184.1
NM_001199256.2	2963	Intron			NP_001186185.1
NM_001199257.2	2963	Intron			NP_001186186.1
NM_138484.4	2963	Intron			NP_612493.1
XM_011533373.2	2963	Intron			XP_011531675.1
XM_011533375.2	2963	Intron			XP_011531677.1
XM_011533376.2	2963	Intron			XP_011531678.1
XM_011533377.2	2963	Intron			XP_011531679.1

Gene

SGO1-AS1

Gene Name

SGO1 antisense RNA 1

There are no transcripts associated with this gene.

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