Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol: B3GALNT1
Entrez Gene ID: 8706
Gene Name: beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
Gene Aliases: B3GALT3, GLCT3, GLOB, Gb4Cer, P, P1, beta3Gal-T3, galT3
Chromosome Location: Chr.3: 161083883 - 161105528 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NM_001038628.1	NP_001033717.1	8 - 8	813	59
	NM_003781.3	NP_003772.1	5 - 5	490	59
	NM_033167.2	NP_149357.1	6 - 6	609	59
	NM_033168.2	NP_149358.1	4 - 4	395	59
	NM_033169.2	NP_149359.1	5 - 5	463	59
	XM_005247859.4	XP_005247916.1	6 - 6	553	59
	XM_005247861.3	XP_005247918.1	7 - 7	673	59
	XM_005247862.3	XP_005247919.1	6 - 6	531	59
	XM_005247864.3	XP_005247921.1	5 - 5	488	59
	XM_006713803.3	XP_006713866.1	7 - 7	672	59
	XM_006713804.3	XP_006713867.1	4 - 4	613	59
	XM_006713805.3	XP_006713868.1	5 - 5	732	59
	XM_017007402.1	XP_016862891.1	6 - 6	627	59
	XM_017007403.1	XP_016862892.1	6 - 6	575	59
	XM_017007404.1	XP_016862893.1	6 - 6	583	59
	XM_017007405.1	XP_016862894.1	5 - 5	456	59
	XM_017007406.1	XP_016862895.1	7 - 7	650	59
	XM_017007407.1	XP_016862896.1	7 - 7	799	59
	XM_017007408.1	XP_016862897.1	6 - 6	702	59
	XM_017007409.1	XP_016862898.1	5 - 5	595	59
	XM_017007410.1	XP_016862899.1	7 - 7	682	59
	XM_017007411.1	XP_016862900.1	5 - 5	604	59
	XM_017007412.1	XP_016862901.1	4 - 4	529	59
GenBank mRNA	AB050855.1	-	1 - 1	152	59
	AB050856.1	-	5 - 5	406	59
	AF132731.1	-	2 - 2	119	59
	AF154848.1	-	5 - 5	439	59
	AK022491.1	-	5 - 5	442	59
	AK095917.1	-	4 - 4	395	59
	AK223439.1	-	5 - 5	403	59
	AK295552.1	-	2 - 2	107	59
	AY359049.1	-	4 - 4	365	59
	BC028571.1	-	8 - 8	735	59
	BC047618.1	-	5 - 5	385	59
	CR457170.1	-	1 - 1	44	59
	DB172381.1	-	2 - 2	187	59
	Y15062.1	-	1 - 1	44	59