Assay Design

The assay primers and probes lie within a single exon. This assay will detect gDNA.

Gene Transcripts

Gene Symbol
MCM3AP-AS1
Entrez Gene ID
114044
Gene Name
MCM3AP antisense RNA 1
Gene Aliases
C21orf85, MCM3AP-AS, MCM3APAS, MCM3APASB, NCRNA00031
Chromosome Location
Chr.21: 46229231 - 46251701 on Build GRCh38
Interrogated Sequence Translated Protein Exon Boundary Assay Location Amplicon Length
RefSeq NR_110566.1 3 - 3 2110 70
NR_110567.1 2 - 2 2101 70


Non Gene Transcripts

Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Transcript Location Amplicon Length
GenBankmRNA AW162461.1 - 1 Chr. 21 - 46242517 - 46242992 [-] on Build GRCh38 70
GenBankmRNA DB508289.1 - 1 237 Chr. 21 - 46242568 - 46242985 [+] on Build GRCh38 70
GenBankmRNA AW265397.1 - 1 Chr. 21 - 46242551 - 46242980 [-] on Build GRCh38 70
GenBankmRNA AF426262.1 - 2 2085 Chr. 21 - 46229247 - 46243001 [+] on Build GRCh38 70
GenBankmRNA AA702534.1 - 1 471 Chr. 21 - 46242334 - 46242845 [+] on Build GRCh38 70
GenBankmRNA DB050398.1 - 1 Chr. 21 - 46242653 - 46242968 [-] on Build GRCh38 70
GenBankmRNA AA158404.1 - 1 Chr. 21 - 46242567 - 46242986 [-] on Build GRCh38 70
GenBankmRNA AW974192.1 - 1 470 Chr. 21 - 46242335 - 46242899 [+] on Build GRCh38 70
GenBankmRNA AW163084.1 - 1 Chr. 21 - 46242549 - 46242992 [-] on Build GRCh38 70
GenBankmRNA AW161799.1 - 1 Chr. 21 - 46242462 - 46242992 [-] on Build GRCh38 70


Adjacent Gene Details

Gene Name Gene Symbol Alias Distance Relative Direction Location Chromosome
Upstream minichromosome maintenance complex component 3 associated protein MCM3AP GANP, MAP80, SAC3 Sense Chr. - 46235125 - 46286274 on Build GRCh38
Downstream ybeY metallopeptidase (putative) YBEY C21orf57 43.3kb Anti-sense Chr. - 46286056 - 46314188 on Build GRCh38

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