Assay Design

The assay probe spans an exon junction.

Gene Transcripts

Gene Symbol: CASC2
Entrez Gene ID: 255082
Gene Name: cancer susceptibility candidate 2 (non-protein coding)
Gene Aliases: C10orf5
Chromosome Location: Chr.10: 118046821 - 118210153 on Build GRCh38

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	Amplicon Length
RefSeq	NR_026939.1		3 - 4	450	67
GenBank mRNA	AY226450.1	-	3 - 4	266	67
	BC036393.1	-	3 - 4	452	67
	BC112306.1	-	2 - 3	174	67
	BC112308.1	-	2 - 3	174	67

Non Gene Transcripts

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	DN994622.1	-	3 - 4	288		Chr. 10 - 118046989 - 118206697 [+] on Build GRCh38	67
GenBankmRNA	DR002051.1	-	3 - 4	282		Chr. 10 - 118046997 - 118206957 [+] on Build GRCh38	67
GenBankmRNA	BI832421.1	-	3 - 4	357		Chr. 10 - 118046489 - 118206649 [+] on Build GRCh38	67
GenBankmRNA	DB228465.1	-	3 - 4	271		Chr. 10 - 118047000 - 118206819 [+] on Build GRCh38	67
GenBankmRNA	BI545848.1	-	3 - 4	444		Chr. 10 - 118046833 - 118207606 [+] on Build GRCh38	67
GenBankmRNA	HY136283.1	-	3 - 4	262		Chr. 10 - 118047011 - 118206712 [+] on Build GRCh38	67
GenBankmRNA	HY054683.1	-	3 - 4	265		Chr. 10 - 118047006 - 118206695 [+] on Build GRCh38	67
GenBankmRNA	BI827242.1	-	3 - 4	247		Chr. 10 - 118047024 - 118206991 [+] on Build GRCh38	67

Adjacent Gene Details

	Gene Name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromosome
Upstream	RAB11 family interacting protein 2	RAB11FIP2	Rab11-FIP2, nRip11	-5.3kb	Anti-sense	Chr. - 118004916 - 118046921 on Build GRCh38
Downstream	family with sequence similarity 204 member A	FAM204A	C10orf84, bA319I23.1	99.2kb	Anti-sense	Chr. - 118305889 - 118342352 on Build GRCh38

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