Assay Design
The assay primers and probes lie within a single exon. This assay will detect gDNA.
Gene Transcripts
- Gene Symbol
- HULC
- Entrez Gene ID
-
728655
- Gene Name
- hepatocellular carcinoma up-regulated long non-coding RNA
- Gene Aliases
-
HCCAT1, LINC00078, NCRNA00078
- Chromosome Location
-
Chr.6: 8652209 - 8653846 on Build GRCh38
Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
Amplicon Length |
RefSeq |
NR_004855.2 |
|
2 - 2 |
350 |
135 |
GenBank mRNA |
AY914050.1 |
- |
2 - 2 |
350 |
135 |
Non Gene Transcripts
Interrogated Sequence |
Translated Protein |
Exon Boundary |
Assay Location |
IMAGE Clone ID |
Transcript Location |
Amplicon Length |
GenBankmRNA |
DB306923.1 |
- |
1 |
|
|
Chr. 6 - 8652137 - 8653822 [-] on Build GRCh38 |
136 |
GenBankmRNA |
AI057233.1 |
- |
1 |
|
|
Chr. 6 - 8652310 - 8653845 [-] on Build GRCh38 |
135 |
GenBankmRNA |
BX116704.1 |
- |
2 |
312 |
|
Chr. 6 - 8652247 - 8653846 [+] on Build GRCh38 |
135 |
GenBankmRNA |
BU534126.1 |
- |
2 |
230 |
|
Chr. 6 - 8652330 - 8653830 [+] on Build GRCh38 |
135 |
Adjacent Gene Details
|
Gene Name |
Gene Symbol |
Alias |
Distance |
Relative Direction |
Location Chromosome |
Upstream |
uncharacterized LOC100506207 |
LOC100506207 |
|
|
Anti-sense |
Chr. - 8435623 - 8785445 on Build GRCh38 |
Downstream |
orofacial cleft 1 candidate 1 |
OFCC1 |
MRDS1 |
1.0mb
|
Sense |
Chr. - 9775808 - 9842630 on Build GRCh38 |
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