Product Details

Primer Sequences
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Primer Chromosome Location
Chr.12: 47975875-47976376 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer™ Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
COL2A1
Entrez Gene ID
1280
Gene Name
collagen type II alpha 1 chain
Gene Aliases
ANFH, AOM, COL11A3, SEDC, STL1
UniGene
Hs.408182
Gene Chromosome Location
Chr.12: 47972965-48006212 on Build GRCh38
Transcripts
NM_001844.4 NM_033150.2 XM_017018828.1 XM_017018829.1 XM_017018830.1 XM_017018831.1

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
939735 c.3557C>A p.P1186H Chr.12: 47976003-47976003 on Build GRCh38
1322490 c.3298G>A p.V1100I Chr.12: 47976055-47976055 on Build GRCh38
4389744 c.3519C>A p.G1173G Chr.12: 47976041-47976041 on Build GRCh38
939737 c.3535G>T p.G1179* Chr.12: 47976025-47976025 on Build GRCh38
287146 c.3301G>A p.G1101S Chr.12: 47976052-47976052 on Build GRCh38
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SNP Detail

SNP ID Chromosome Location
rs963860927 Chr.12: 47976234-47976234 on Build GRCh38
rs1000839040 Chr.12: 47975908-47975908 on Build GRCh38
rs769826267 Chr.12: 47976351-47976351 on Build GRCh38
rs566528045 Chr.12: 47975978-47975978 on Build GRCh38
rs554937059 Chr.12: 47976098-47976098 on Build GRCh38
rs34613777 Chr.12: 47976026-47976026 on Build GRCh38
rs770997944 Chr.12: 47976009-47976009 on Build GRCh38
rs767141379 Chr.12: 47976317-47976317 on Build GRCh38
rs755514365 Chr.12: 47975982-47975982 on Build GRCh38
rs755689448 Chr.12: 47975973-47975973 on Build GRCh38
rs536885536 Chr.12: 47975999-47975999 on Build GRCh38
rs372919701 Chr.12: 47975930-47975930 on Build GRCh38
rs781222366 Chr.12: 47976107-47976107 on Build GRCh38
rs73297147 Chr.12: 47975901-47975901 on Build GRCh38
rs1049573544 Chr.12: 47976257-47976257 on Build GRCh38
rs147750391 Chr.12: 47976049-47976049 on Build GRCh38
rs574505074 Chr.12: 47976136-47976136 on Build GRCh38
rs374156023 Chr.12: 47976066-47976066 on Build GRCh38
rs780110289 Chr.12: 47976076-47976077 on Build GRCh38
rs968596067 Chr.12: 47975909-47975909 on Build GRCh38
rs560214659 Chr.12: 47976160-47976160 on Build GRCh38
rs972683794 Chr.12: 47976183-47976183 on Build GRCh38
rs1049543609 Chr.12: 47976035-47976035 on Build GRCh38
rs906963357 Chr.12: 47976161-47976161 on Build GRCh38
rs374737704 Chr.12: 47976294-47976295 on Build GRCh38
rs575733276 Chr.12: 47976077-47976077 on Build GRCh38
rs886042651 Chr.12: 47975986-47975986 on Build GRCh38
rs959465573 Chr.12: 47976151-47976151 on Build GRCh38
rs369406965 Chr.12: 47976304-47976304 on Build GRCh38
rs778292426 Chr.12: 47976088-47976088 on Build GRCh38
rs1793950 Chr.12: 47975969-47975969 on Build GRCh38
rs772546486 Chr.12: 47975995-47975995 on Build GRCh38
rs758889025 Chr.12: 47976079-47976079 on Build GRCh38
rs57138989 Chr.12: 47976140-47976140 on Build GRCh38
rs200431123 Chr.12: 47975916-47975916 on Build GRCh38
rs748549541 Chr.12: 47975991-47975991 on Build GRCh38
rs373342819 Chr.12: 47976331-47976331 on Build GRCh38
rs759490155 Chr.12: 47976020-47976020 on Build GRCh38
rs889605257 Chr.12: 47976260-47976260 on Build GRCh38
rs939977391 Chr.12: 47976179-47976179 on Build GRCh38
rs1045732061 Chr.12: 47976117-47976117 on Build GRCh38
rs779615996 Chr.12: 47976073-47976073 on Build GRCh38
rs77450687 Chr.12: 47976272-47976272 on Build GRCh38
rs759225305 Chr.12: 47976305-47976305 on Build GRCh38
rs371633786 Chr.12: 47976053-47976053 on Build GRCh38
rs758289569 Chr.12: 47976111-47976111 on Build GRCh38
rs771172203 Chr.12: 47976211-47976211 on Build GRCh38
rs767204398 Chr.12: 47975934-47975934 on Build GRCh38
rs774249345 Chr.12: 47976047-47976047 on Build GRCh38
rs200223738 Chr.12: 47976089-47976089 on Build GRCh38
rs779252535 Chr.12: 47975985-47975985 on Build GRCh38
rs1021282282 Chr.12: 47976320-47976320 on Build GRCh38
rs145571589 Chr.12: 47976292-47976293 on Build GRCh38
rs371983027 Chr.12: 47975913-47975913 on Build GRCh38
rs755010259 Chr.12: 47975994-47975994 on Build GRCh38
rs121912870 Chr.12: 47975971-47975971 on Build GRCh38
rs917936634 Chr.12: 47976174-47976174 on Build GRCh38
rs200819477 Chr.12: 47975933-47975933 on Build GRCh38
rs539964790 Chr.12: 47976095-47976096 on Build GRCh38
rs1008288677 Chr.12: 47976220-47976223 on Build GRCh38
rs891460667 Chr.12: 47976314-47976314 on Build GRCh38
rs369259635 Chr.12: 47975981-47975981 on Build GRCh38
rs760390497 Chr.12: 47976055-47976055 on Build GRCh38
rs992230760 Chr.12: 47976173-47976173 on Build GRCh38
rs750044717 Chr.12: 47975938-47975938 on Build GRCh38
rs777567065 Chr.12: 47976129-47976129 on Build GRCh38
rs369451393 Chr.12: 47976056-47976056 on Build GRCh38
rs1040749429 Chr.12: 47976306-47976306 on Build GRCh38
rs121912883 Chr.12: 47976043-47976043 on Build GRCh38
rs774337456 Chr.12: 47976118-47976118 on Build GRCh38
rs891429838 Chr.12: 47976081-47976081 on Build GRCh38
rs74088779 Chr.12: 47976222-47976222 on Build GRCh38
rs758237369 Chr.12: 47975946-47975946 on Build GRCh38
rs121912891 Chr.12: 47976052-47976052 on Build GRCh38
rs776772930 Chr.12: 47976014-47976014 on Build GRCh38
rs1021584140 Chr.12: 47976103-47976103 on Build GRCh38
rs552966715 Chr.12: 47975915-47975915 on Build GRCh38
rs545968052 Chr.12: 47976235-47976235 on Build GRCh38
rs753420046 Chr.12: 47976062-47976062 on Build GRCh38
rs915629246 Chr.12: 47976352-47976352 on Build GRCh38
rs919872843 Chr.12: 47976217-47976217 on Build GRCh38
rs1001097580 Chr.12: 47976350-47976350 on Build GRCh38

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