Product Details

Primer Sequences

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Primer Chromosome Location

Chr.12: 40933239-40933833 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CNTN1

Entrez Gene ID

1272

Gene Name

contactin 1

Gene Aliases

F3, GP135, MYPCN

UniGene

Hs.143434

Gene Chromosome Location

Chr.12: 40692439-41072412 on Build GRCh38

Transcripts

NM_001256063.1 NM_001256064.1 NM_001843.3 NM_175038.2 XM_005268651.2 XM_006719241.2 XM_011537926.2 XM_011537927.2 XM_017018821.1 XM_017018822.1 XM_017018823.1 XM_017018824.1 XM_017018825.1 XM_017018826.1 XM_017018827.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4207049	c.793G>T	p.A265S	Chr.12: 40933550-40933550 on Build GRCh38
6136667	c.877G>T	p.A293S	Chr.12: 40933770-40933770 on Build GRCh38
1628585	c.751G>T	p.V251L	Chr.12: 40933508-40933508 on Build GRCh38
6072348	c.755A>G	p.Y252C	Chr.12: 40933512-40933512 on Build GRCh38
6631702	c.752T>C	p.V251A	Chr.12: 40933509-40933509 on Build GRCh38
3792572	c.801A>T	p.G267G	Chr.12: 40933558-40933558 on Build GRCh38
6072347	c.755A>G	p.Y252C	Chr.12: 40933512-40933512 on Build GRCh38
4575376	c.851G>T	p.S284I	Chr.12: 40933744-40933744 on Build GRCh38
4041681	c.821G>A	p.R274Q	Chr.12: 40933714-40933714 on Build GRCh38
4041684	c.860A>C	p.E287A	Chr.12: 40933753-40933753 on Build GRCh38
5577354	c.819C>T	p.I273I	Chr.12: 40933712-40933712 on Build GRCh38
2066198	c.793G>T	p.A265S	Chr.12: 40933550-40933550 on Build GRCh38
1238547	c.876G>T	p.G292G	Chr.12: 40933769-40933769 on Build GRCh38
4041677	c.742T>C	p.F248L	Chr.12: 40933499-40933499 on Build GRCh38
693175	c.937G>A	p.E313K	Chr.12: 40933830-40933830 on Build GRCh38
693177	c.777G>C	p.V259V	Chr.12: 40933534-40933534 on Build GRCh38
5018080	c.826C>T	p.R276W	Chr.12: 40933719-40933719 on Build GRCh38
4041683	c.860A>C	p.E287A	Chr.12: 40933753-40933753 on Build GRCh38
1361484	c.825G>A	p.W275*	Chr.12: 40933718-40933718 on Build GRCh38
6136666	c.877G>T	p.A293S	Chr.12: 40933770-40933770 on Build GRCh38
6136669	c.727G>T	p.D243Y	Chr.12: 40933484-40933484 on Build GRCh38
7419118	c.812C>T	p.P271L	Chr.12: 40933705-40933705 on Build GRCh38
6631728	c.935C>T	p.A312V	Chr.12: 40933828-40933828 on Build GRCh38
6631701	c.752T>C	p.V251A	Chr.12: 40933509-40933509 on Build GRCh38
4041678	c.767G>A	p.G256D	Chr.12: 40933524-40933524 on Build GRCh38
4207050	c.813G>A	p.P271P	Chr.12: 40933706-40933706 on Build GRCh38
1361482	c.767G>T	p.G256V	Chr.12: 40933524-40933524 on Build GRCh38
5577355	c.819C>T	p.I273I	Chr.12: 40933712-40933712 on Build GRCh38
3986910	c.895A>C	p.N299H	Chr.12: 40933788-40933788 on Build GRCh38
1322524	c.827G>A	p.R276Q	Chr.12: 40933720-40933720 on Build GRCh38
3359715	c.835C>A	p.L279I	Chr.12: 40933728-40933728 on Build GRCh38
6072346	c.821G>C	p.R274P	Chr.12: 40933714-40933714 on Build GRCh38
5528853	c.814G>A	p.D272N	Chr.12: 40933707-40933707 on Build GRCh38
6520141	c.819C>A	p.I273I	Chr.12: 40933712-40933712 on Build GRCh38
6072345	c.821G>C	p.R274P	Chr.12: 40933714-40933714 on Build GRCh38
5018079	c.826C>T	p.R276W	Chr.12: 40933719-40933719 on Build GRCh38
6520142	c.819C>A	p.I273I	Chr.12: 40933712-40933712 on Build GRCh38
4041682	c.827G>A	p.R276Q	Chr.12: 40933720-40933720 on Build GRCh38
1582145	c.709A>C	p.T237P	Chr.12: 40933466-40933466 on Build GRCh38
4575377	c.851G>T	p.S284I	Chr.12: 40933744-40933744 on Build GRCh38
7088012	c.931G>A	p.E311K	Chr.12: 40933824-40933824 on Build GRCh38
6631727	c.935C>T	p.A312V	Chr.12: 40933828-40933828 on Build GRCh38
5987365	c.727G>A	p.D243N	Chr.12: 40933484-40933484 on Build GRCh38
3359714	c.835C>A	p.L279I	Chr.12: 40933728-40933728 on Build GRCh38
7088011	c.931G>A	p.E311K	Chr.12: 40933824-40933824 on Build GRCh38
2066199	c.813G>A	p.P271P	Chr.12: 40933706-40933706 on Build GRCh38
693178	c.755A>T	p.Y252F	Chr.12: 40933512-40933512 on Build GRCh38
7419117	c.812C>T	p.P271L	Chr.12: 40933705-40933705 on Build GRCh38
4962343	c.704G>A	p.R235Q	Chr.12: 40933461-40933461 on Build GRCh38
4041679	c.767G>A	p.G256D	Chr.12: 40933524-40933524 on Build GRCh38
5173088	c.767G>T	p.G256V	Chr.12: 40933524-40933524 on Build GRCh38
319538	c.757G>T	p.A253S	Chr.12: 40933514-40933514 on Build GRCh38
3871554	c.903G>A	p.Q301Q	Chr.12: 40933796-40933796 on Build GRCh38
5100979	c.820C>T	p.R274*	Chr.12: 40933713-40933713 on Build GRCh38
122231	c.844A>T	p.M282L	Chr.12: 40933737-40933737 on Build GRCh38
3986911	c.895A>C	p.N299H	Chr.12: 40933788-40933788 on Build GRCh38
310191	c.913G>T	p.E305*	Chr.12: 40933806-40933806 on Build GRCh38
693176	c.806C>T	p.P269L	Chr.12: 40933699-40933699 on Build GRCh38
5987364	c.727G>A	p.D243N	Chr.12: 40933484-40933484 on Build GRCh38
5099021	c.825G>A	p.W275*	Chr.12: 40933718-40933718 on Build GRCh38
5528852	c.814G>A	p.D272N	Chr.12: 40933707-40933707 on Build GRCh38
4962344	c.704G>A	p.R235Q	Chr.12: 40933461-40933461 on Build GRCh38
4041676	c.742T>C	p.F248L	Chr.12: 40933499-40933499 on Build GRCh38
3871555	c.903G>A	p.Q301Q	Chr.12: 40933796-40933796 on Build GRCh38
1361483	c.820C>T	p.R274*	Chr.12: 40933713-40933713 on Build GRCh38
1163004	c.754T>C	p.Y252H	Chr.12: 40933511-40933511 on Build GRCh38
4041680	c.821G>A	p.R274Q	Chr.12: 40933714-40933714 on Build GRCh38
6136668	c.727G>T	p.D243Y	Chr.12: 40933484-40933484 on Build GRCh38
3792571	c.801A>T	p.G267G	Chr.12: 40933558-40933558 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs749834632	Chr.12: 40933765-40933766 on Build GRCh38
rs778449042	Chr.12: 40933581-40933581 on Build GRCh38
rs765149060	Chr.12: 40933789-40933789 on Build GRCh38
rs552921973	Chr.12: 40933290-40933290 on Build GRCh38
rs796927032	Chr.12: 40933624-40933625 on Build GRCh38
rs758956439	Chr.12: 40933481-40933481 on Build GRCh38
rs747626974	Chr.12: 40933589-40933589 on Build GRCh38
rs773699933	Chr.12: 40933595-40933595 on Build GRCh38
rs144047921	Chr.12: 40933719-40933719 on Build GRCh38
rs957638697	Chr.12: 40933630-40933630 on Build GRCh38
rs574860448	Chr.12: 40933366-40933366 on Build GRCh38
rs557373219	Chr.12: 40933276-40933276 on Build GRCh38
rs997165991	Chr.12: 40933265-40933274 on Build GRCh38
rs983528939	Chr.12: 40933406-40933406 on Build GRCh38
rs145955800	Chr.12: 40933794-40933794 on Build GRCh38
rs1036256810	Chr.12: 40933735-40933735 on Build GRCh38
rs375392779	Chr.12: 40933575-40933575 on Build GRCh38
rs773748002	Chr.12: 40933415-40933415 on Build GRCh38
rs776868385	Chr.12: 40933610-40933610 on Build GRCh38
rs200145508	Chr.12: 40933670-40933670 on Build GRCh38
rs761007424	Chr.12: 40933436-40933436 on Build GRCh38
rs1001470110	Chr.12: 40933354-40933354 on Build GRCh38
rs937462249	Chr.12: 40933698-40933698 on Build GRCh38
rs897467981	Chr.12: 40933746-40933746 on Build GRCh38
rs1045867653	Chr.12: 40933319-40933319 on Build GRCh38
rs747859026	Chr.12: 40933708-40933708 on Build GRCh38
rs587776718	Chr.12: 40933764-40933765 on Build GRCh38
rs757218571	Chr.12: 40933509-40933509 on Build GRCh38
rs375708810	Chr.12: 40933676-40933676 on Build GRCh38
rs572715662	Chr.12: 40933616-40933616 on Build GRCh38
rs56323985	Chr.12: 40933625-40933625 on Build GRCh38
rs538243746	Chr.12: 40933332-40933332 on Build GRCh38
rs55976072	Chr.12: 40933624-40933624 on Build GRCh38
rs771359796	Chr.12: 40933721-40933721 on Build GRCh38
rs766198445	Chr.12: 40933781-40933781 on Build GRCh38
rs1021883816	Chr.12: 40933334-40933334 on Build GRCh38
rs746184282	Chr.12: 40933730-40933730 on Build GRCh38
rs900742739	Chr.12: 40933262-40933262 on Build GRCh38
rs779849920	Chr.12: 40933685-40933685 on Build GRCh38
rs796312692	Chr.12: 40933353-40933353 on Build GRCh38
rs752951944	Chr.12: 40933410-40933410 on Build GRCh38
rs1051401838	Chr.12: 40933752-40933752 on Build GRCh38
rs997199034	Chr.12: 40933516-40933516 on Build GRCh38
rs199647238	Chr.12: 40933623-40933623 on Build GRCh38
rs764970741	Chr.12: 40933683-40933683 on Build GRCh38
rs764202885	Chr.12: 40933763-40933763 on Build GRCh38
rs374647402	Chr.12: 40933662-40933662 on Build GRCh38
rs367865918	Chr.12: 40933783-40933783 on Build GRCh38
rs761240540	Chr.12: 40933598-40933598 on Build GRCh38
rs772600743	Chr.12: 40933433-40933433 on Build GRCh38
rs149305190	Chr.12: 40933487-40933487 on Build GRCh38
rs867956389	Chr.12: 40933472-40933472 on Build GRCh38
rs530752245	Chr.12: 40933380-40933380 on Build GRCh38
rs570716833	Chr.12: 40933300-40933300 on Build GRCh38
rs200022020	Chr.12: 40933766-40933766 on Build GRCh38
rs957883894	Chr.12: 40933284-40933284 on Build GRCh38
rs779778967	Chr.12: 40933543-40933543 on Build GRCh38
rs781242588	Chr.12: 40933511-40933511 on Build GRCh38
rs950873423	Chr.12: 40933393-40933393 on Build GRCh38
rs771622826	Chr.12: 40933593-40933593 on Build GRCh38
rs771256157	Chr.12: 40933603-40933603 on Build GRCh38
rs375008317	Chr.12: 40933450-40933450 on Build GRCh38
rs199622338	Chr.12: 40933701-40933701 on Build GRCh38
rs759678214	Chr.12: 40933464-40933464 on Build GRCh38
rs367549221	Chr.12: 40933478-40933478 on Build GRCh38
rs748913992	Chr.12: 40933574-40933574 on Build GRCh38
rs372328375	Chr.12: 40933513-40933513 on Build GRCh38
rs1042788910	Chr.12: 40933661-40933661 on Build GRCh38
rs770242044	Chr.12: 40933741-40933741 on Build GRCh38
rs967383840	Chr.12: 40933682-40933682 on Build GRCh38
rs992199884	Chr.12: 40933378-40933378 on Build GRCh38
rs775839275	Chr.12: 40933748-40933748 on Build GRCh38
rs778411720	Chr.12: 40933706-40933706 on Build GRCh38
rs1034297105	Chr.12: 40933365-40933365 on Build GRCh38
rs946081982	Chr.12: 40933318-40933318 on Build GRCh38
rs201982650	Chr.12: 40933498-40933498 on Build GRCh38
rs763333899	Chr.12: 40933759-40933759 on Build GRCh38
rs752740643	Chr.12: 40933507-40933507 on Build GRCh38
rs554314947	Chr.12: 40933612-40933612 on Build GRCh38
rs200759494	Chr.12: 40933675-40933675 on Build GRCh38
rs756134091	Chr.12: 40933680-40933680 on Build GRCh38
rs552483875	Chr.12: 40933458-40933458 on Build GRCh38
rs201607834	Chr.12: 40933720-40933720 on Build GRCh38
rs753864544	Chr.12: 40933782-40933782 on Build GRCh38
rs1007757023	Chr.12: 40933770-40933770 on Build GRCh38
rs575916673	Chr.12: 40933372-40933372 on Build GRCh38
rs369343021	Chr.12: 40933660-40933660 on Build GRCh38
rs556331560	Chr.12: 40933345-40933345 on Build GRCh38
rs548330075	Chr.12: 40933798-40933798 on Build GRCh38
rs887698166	Chr.12: 40933374-40933374 on Build GRCh38
rs758056182	Chr.12: 40933802-40933802 on Build GRCh38
rs56172264	Chr.12: 40933689-40933689 on Build GRCh38
rs762335667	Chr.12: 40933420-40933420 on Build GRCh38
rs374930846	Chr.12: 40933460-40933460 on Build GRCh38
rs374200408	Chr.12: 40933714-40933714 on Build GRCh38
rs200611219	Chr.12: 40933625-40933625 on Build GRCh38
rs139270901	Chr.12: 40933530-40933530 on Build GRCh38
rs1051869143	Chr.12: 40933623-40933623 on Build GRCh38
rs755959346	Chr.12: 40933517-40933517 on Build GRCh38
rs928683884	Chr.12: 40933697-40933697 on Build GRCh38
rs760650497	Chr.12: 40933775-40933775 on Build GRCh38
rs773751348	Chr.12: 40933434-40933434 on Build GRCh38

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