Product Details

Primer Sequences

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Primer Chromosome Location

Chr.3: 130566623-130567124 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

COL6A6

Entrez Gene ID

131873

Gene Name

collagen type VI alpha 6

Gene Aliases

-

UniGene

Hs.591282

Gene Chromosome Location

Chr.3: 130516709-130678135 on Build GRCh38

Transcripts

NM_001102608.1 XM_005247121.4 XM_011512423.2 XM_011512424.2 XM_011512425.2 XM_011512426.2 XM_011512428.2 XM_011512431.2 XM_011512432.2 XM_017005711.1 XM_017005712.1 XM_017005713.1 XM_017005714.1 XM_017005715.1 XM_017005716.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
7237938	c.1554A>G	p.A518A	Chr.3: 130566973-130566973 on Build GRCh38
6282634	c.1598G>A	p.R533Q	Chr.3: 130567017-130567017 on Build GRCh38
4113460	c.1503G>A	p.K501K	Chr.3: 130566922-130566922 on Build GRCh38
4896971	c.1647C>T	p.S549S	Chr.3: 130567066-130567066 on Build GRCh38
5444650	c.1395G>A	p.M465I	Chr.3: 130566814-130566814 on Build GRCh38
6633733	c.1585G>A	p.A529T	Chr.3: 130567004-130567004 on Build GRCh38
1248931	c.1456T>G	p.L486V	Chr.3: 130566875-130566875 on Build GRCh38
3944843	c.1283-9C>T	p.?	Chr.3: 130566693-130566693 on Build GRCh38
728481	c.1409C>T	p.P470L	Chr.3: 130566828-130566828 on Build GRCh38
6163204	c.1690C>A	p.H564N	Chr.3: 130567109-130567109 on Build GRCh38
1644505	c.1597C>T	p.R533*	Chr.3: 130567016-130567016 on Build GRCh38
4761328	c.1462T>C	p.F488L	Chr.3: 130566881-130566881 on Build GRCh38
6511532	c.1456T>A	p.L486M	Chr.3: 130566875-130566875 on Build GRCh38
225178	c.1600G>A	p.G534R	Chr.3: 130567019-130567019 on Build GRCh38
3587371	c.1458G>A	p.L486L	Chr.3: 130566877-130566877 on Build GRCh38
3587367	c.1335G>A	p.G445G	Chr.3: 130566754-130566754 on Build GRCh38
6633693	c.1472A>G	p.N491S	Chr.3: 130566891-130566891 on Build GRCh38
5708469	c.1444G>T	p.D482Y	Chr.3: 130566863-130566863 on Build GRCh38
3060861	c.1528G>A	p.G510S	Chr.3: 130566947-130566947 on Build GRCh38
4939543	c.1450T>A	p.W484R	Chr.3: 130566869-130566869 on Build GRCh38
7430111	c.1569G>A	p.L523L	Chr.3: 130566988-130566988 on Build GRCh38
5398160	c.1360G>A	p.E454K	Chr.3: 130566779-130566779 on Build GRCh38
1471581	c.1432G>A	p.V478I	Chr.3: 130566851-130566851 on Build GRCh38
3060869	c.1643T>C	p.M548T	Chr.3: 130567062-130567062 on Build GRCh38
1418952	c.1668T>A	p.P556P	Chr.3: 130567087-130567087 on Build GRCh38
4599429	c.1360G>T	p.E454*	Chr.3: 130566779-130566779 on Build GRCh38
1418948	c.1324G>A	p.D442N	Chr.3: 130566743-130566743 on Build GRCh38
1202021	c.1351G>T	p.D451Y	Chr.3: 130566770-130566770 on Build GRCh38
3759747	c.1666C>T	p.P556S	Chr.3: 130567085-130567085 on Build GRCh38
1616892	c.1693_1694insT	p.R566fs*30	Chr.3: 130567112-130567113 on Build GRCh38
6096254	c.1518C>A	p.I506I	Chr.3: 130566937-130566937 on Build GRCh38
4113462	c.1696C>T	p.R566*	Chr.3: 130567115-130567115 on Build GRCh38
3725185	c.1695C>T	p.I565I	Chr.3: 130567114-130567114 on Build GRCh38
6633739	c.1486A>T	p.K496*	Chr.3: 130566905-130566905 on Build GRCh38
7117680	c.1674C>A	p.N558K	Chr.3: 130567093-130567093 on Build GRCh38
5065683	c.1379C>A	p.S460*	Chr.3: 130566798-130566798 on Build GRCh38
4157266	c.1382A>C	p.E461A	Chr.3: 130566801-130566801 on Build GRCh38
301410	c.1549_1550GC>TT	p.A517L	Chr.3: 130566968-130566969 on Build GRCh38
3940284	c.1576T>A	p.L526M	Chr.3: 130566995-130566995 on Build GRCh38
6022586	c.1524G>T	p.Q508H	Chr.3: 130566943-130566943 on Build GRCh38
204099	c.1430C>T	p.A477V	Chr.3: 130566849-130566849 on Build GRCh38
1718486	c.1375C>T	p.L459L	Chr.3: 130566794-130566794 on Build GRCh38
3944845	c.1529G>T	p.G510V	Chr.3: 130566948-130566948 on Build GRCh38
4937412	c.1474A>G	p.K492E	Chr.3: 130566893-130566893 on Build GRCh38
221684	c.1426G>A	p.G476R	Chr.3: 130566845-130566845 on Build GRCh38
3587369	c.1356C>T	p.F452F	Chr.3: 130566775-130566775 on Build GRCh38
7322898	c.1541A>G	p.N514S	Chr.3: 130566960-130566960 on Build GRCh38
3587365	c.1334G>A	p.G445E	Chr.3: 130566753-130566753 on Build GRCh38
6026885	c.1420C>T	p.R474W	Chr.3: 130566839-130566839 on Build GRCh38
1308566	c.1444G>A	p.D482N	Chr.3: 130566863-130566863 on Build GRCh38
3060867	c.1628T>C	p.V543A	Chr.3: 130567047-130567047 on Build GRCh38
3427059	c.1323C>T	p.I441I	Chr.3: 130566742-130566742 on Build GRCh38
4528704	c.1557G>A	p.L519L	Chr.3: 130566976-130566976 on Build GRCh38
6241563	c.1297G>T	p.E433*	Chr.3: 130566716-130566716 on Build GRCh38
445579	c.1370C>T	p.T457M	Chr.3: 130566789-130566789 on Build GRCh38
5550147	c.1670C>G	p.A557G	Chr.3: 130567089-130567089 on Build GRCh38
3060873	c.1682G>C	p.R561T	Chr.3: 130567101-130567101 on Build GRCh38
402359	c.1587A>G	p.A529A	Chr.3: 130567006-130567006 on Build GRCh38
1202014	c.1379C>T	p.S460L	Chr.3: 130566798-130566798 on Build GRCh38
479413	c.1664A>G	p.E555G	Chr.3: 130567083-130567083 on Build GRCh38
5708471	c.1666C>A	p.P556T	Chr.3: 130567085-130567085 on Build GRCh38
4113458	c.1421G>A	p.R474Q	Chr.3: 130566840-130566840 on Build GRCh38
122305	c.1573C>G	p.L525V	Chr.3: 130566992-130566992 on Build GRCh38
3914923	c.1329C>T	p.G443G	Chr.3: 130566748-130566748 on Build GRCh38
6900717	c.1674C>T	p.N558N	Chr.3: 130567093-130567093 on Build GRCh38
1418950	c.1659C>A	p.I553I	Chr.3: 130567078-130567078 on Build GRCh38
5729123	c.1283G>A	p.G428D	Chr.3: 130566702-130566702 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs780921807	Chr.3: 130566942-130566942 on Build GRCh38
rs551912849	Chr.3: 130566950-130566950 on Build GRCh38
rs778201799	Chr.3: 130566905-130566905 on Build GRCh38
rs11921769	Chr.3: 130566801-130566801 on Build GRCh38
rs745557112	Chr.3: 130566961-130566961 on Build GRCh38
rs763062555	Chr.3: 130567017-130567017 on Build GRCh38
rs752810157	Chr.3: 130566812-130566820 on Build GRCh38
rs771149039	Chr.3: 130566988-130566988 on Build GRCh38
rs1020649956	Chr.3: 130566981-130566981 on Build GRCh38
rs764160244	Chr.3: 130567023-130567023 on Build GRCh38
rs759747410	Chr.3: 130567009-130567009 on Build GRCh38
rs201682544	Chr.3: 130566839-130566839 on Build GRCh38
rs768246772	Chr.3: 130566658-130566659 on Build GRCh38
rs755821962	Chr.3: 130567044-130567044 on Build GRCh38
rs899824706	Chr.3: 130566809-130566809 on Build GRCh38
rs200095455	Chr.3: 130566662-130566662 on Build GRCh38
rs373909064	Chr.3: 130566742-130566742 on Build GRCh38
rs779001805	Chr.3: 130566778-130566778 on Build GRCh38
rs753943734	Chr.3: 130566870-130566870 on Build GRCh38
rs750228240	Chr.3: 130567040-130567040 on Build GRCh38
rs931417794	Chr.3: 130567062-130567062 on Build GRCh38
rs995600884	Chr.3: 130566721-130566721 on Build GRCh38
rs756964248	Chr.3: 130566934-130566934 on Build GRCh38
rs1039829413	Chr.3: 130566802-130566802 on Build GRCh38
rs746722067	Chr.3: 130566686-130566686 on Build GRCh38
rs774968132	Chr.3: 130566840-130566840 on Build GRCh38
rs771930771	Chr.3: 130566674-130566674 on Build GRCh38
rs751376141	Chr.3: 130566912-130566912 on Build GRCh38
rs765546572	Chr.3: 130567010-130567010 on Build GRCh38
rs1004100910	Chr.3: 130566821-130566821 on Build GRCh38
rs199669411	Chr.3: 130566818-130566818 on Build GRCh38
rs957927770	Chr.3: 130566952-130566952 on Build GRCh38
rs114818609	Chr.3: 130566842-130566842 on Build GRCh38
rs777747583	Chr.3: 130566789-130566789 on Build GRCh38
rs767928089	Chr.3: 130566743-130566743 on Build GRCh38
rs765475073	Chr.3: 130566891-130566891 on Build GRCh38
rs181863743	Chr.3: 130567055-130567055 on Build GRCh38
rs747661431	Chr.3: 130567020-130567021 on Build GRCh38
rs760901421	Chr.3: 130566850-130566850 on Build GRCh38
rs1037851640	Chr.3: 130567003-130567003 on Build GRCh38
rs371953457	Chr.3: 130566968-130566968 on Build GRCh38
rs200975034	Chr.3: 130566990-130566990 on Build GRCh38
rs766489465	Chr.3: 130566764-130566764 on Build GRCh38
rs931343998	Chr.3: 130566812-130566812 on Build GRCh38
rs946178422	Chr.3: 130566740-130566740 on Build GRCh38
rs375571886	Chr.3: 130566984-130566984 on Build GRCh38
rs36113896	Chr.3: 130566949-130566950 on Build GRCh38
rs376855447	Chr.3: 130567090-130567090 on Build GRCh38
rs764691137	Chr.3: 130566739-130566739 on Build GRCh38
rs748799802	Chr.3: 130567047-130567047 on Build GRCh38
rs754994346	Chr.3: 130566661-130566661 on Build GRCh38
rs370634287	Chr.3: 130566772-130566772 on Build GRCh38
rs776921608	Chr.3: 130567070-130567070 on Build GRCh38
rs371128941	Chr.3: 130566820-130566820 on Build GRCh38
rs758918919	Chr.3: 130566719-130566719 on Build GRCh38
rs368961411	Chr.3: 130567060-130567060 on Build GRCh38
rs769406385	Chr.3: 130566963-130566963 on Build GRCh38
rs368134547	Chr.3: 130566967-130566967 on Build GRCh38
rs367786873	Chr.3: 130566848-130566848 on Build GRCh38
rs563018482	Chr.3: 130566667-130566667 on Build GRCh38
rs746754743	Chr.3: 130566790-130566790 on Build GRCh38
rs747514989	Chr.3: 130567064-130567064 on Build GRCh38
rs773523160	Chr.3: 130566970-130566970 on Build GRCh38
rs143108657	Chr.3: 130567039-130567039 on Build GRCh38
rs906366900	Chr.3: 130566894-130566894 on Build GRCh38
rs776250966	Chr.3: 130566694-130566694 on Build GRCh38
rs369313731	Chr.3: 130567098-130567098 on Build GRCh38
rs753975650	Chr.3: 130566769-130566769 on Build GRCh38
rs374174918	Chr.3: 130566898-130566898 on Build GRCh38
rs770456089	Chr.3: 130566690-130566690 on Build GRCh38
rs759679482	Chr.3: 130566871-130566871 on Build GRCh38
rs749555717	Chr.3: 130566996-130566996 on Build GRCh38
rs376463408	Chr.3: 130566744-130566744 on Build GRCh38
rs59021909	Chr.3: 130567085-130567085 on Build GRCh38
rs777798650	Chr.3: 130566900-130566900 on Build GRCh38
rs371268873	Chr.3: 130566892-130566892 on Build GRCh38
rs780840044	Chr.3: 130566998-130566999 on Build GRCh38
rs189434004	Chr.3: 130566965-130566965 on Build GRCh38
rs760999441	Chr.3: 130566763-130566763 on Build GRCh38
rs1025226709	Chr.3: 130566726-130566726 on Build GRCh38
rs751405197	Chr.3: 130567035-130567035 on Build GRCh38
rs977562851	Chr.3: 130566751-130566751 on Build GRCh38
rs775728744	Chr.3: 130567016-130567016 on Build GRCh38
rs374279156	Chr.3: 130566788-130566788 on Build GRCh38
rs747991460	Chr.3: 130566664-130566664 on Build GRCh38
rs773017155	Chr.3: 130566679-130566679 on Build GRCh38
rs766657514	Chr.3: 130566851-130566851 on Build GRCh38
rs112472535	Chr.3: 130567036-130567036 on Build GRCh38
rs771433710	Chr.3: 130567066-130567066 on Build GRCh38

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