Product Details

Primer Sequences

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Primer Chromosome Location

Chr.3: 108353190-108353781 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

HHLA2

Entrez Gene ID

11148

Gene Name

HERV-H LTR-associating 2

Gene Aliases

B7-H5, B7-H7, B7H7, B7y

UniGene

Hs.225968

Gene Chromosome Location

Chr.3: 108296490-108378285 on Build GRCh38

Transcripts

NM_001282556.1 NM_001282557.1 NM_001282558.1 NM_001282559.1 NM_007072.3 XM_005247080.3 XM_011512362.1 XM_011512363.1 XM_011512364.1 XM_011512367.2 XM_017005642.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
4979608	c.266C>A	p.A89E	Chr.3: 108353628-108353628 on Build GRCh38
2916728	c.311C>T	p.A104V	Chr.3: 108353673-108353673 on Build GRCh38
2916732	c.346G>A	p.E116K	Chr.3: 108353708-108353708 on Build GRCh38
2916725	c.291T>C	p.N97N	Chr.3: 108353653-108353653 on Build GRCh38
7327393	c.200_201insTAGC	p.Y69fs*1	Chr.3: 108353562-108353563 on Build GRCh38
4973906	c.348A>C	p.E116D	Chr.3: 108353710-108353710 on Build GRCh38
2916727	c.306G>A	p.G102G	Chr.3: 108353668-108353668 on Build GRCh38
727439	c.186C>T	p.H62H	Chr.3: 108353548-108353548 on Build GRCh38
3759587	c.216C>T	p.H72H	Chr.3: 108353578-108353578 on Build GRCh38
2916717	c.87C>T	p.F29F	Chr.3: 108353449-108353449 on Build GRCh38
3759589	c.315G>A	p.S105S	Chr.3: 108353677-108353677 on Build GRCh38
727433	c.371G>T	p.G124V	Chr.3: 108353733-108353733 on Build GRCh38
5918106	c.416G>A	p.G139E	Chr.3: 108353778-108353778 on Build GRCh38
5918108	c.189G>A	p.W63*	Chr.3: 108353551-108353551 on Build GRCh38
727437	c.370G>T	p.G124*	Chr.3: 108353732-108353732 on Build GRCh38
3669060	c.201T>C	p.D67D	Chr.3: 108353563-108353563 on Build GRCh38
4002363	c.89T>C	p.I30T	Chr.3: 108353451-108353451 on Build GRCh38
1036029	c.385G>T	p.V129L	Chr.3: 108353747-108353747 on Build GRCh38
320815	c.145C>G	p.L49V	Chr.3: 108353507-108353507 on Build GRCh38
3944634	c.65-8G>A	p.?	Chr.3: 108353419-108353419 on Build GRCh38
6333469	c.314C>A	p.S105*	Chr.3: 108353676-108353676 on Build GRCh38
1036025	c.214C>A	p.H72N	Chr.3: 108353576-108353576 on Build GRCh38
6356561	c.178G>A	p.V60I	Chr.3: 108353540-108353540 on Build GRCh38
1036027	c.280C>A	p.L94I	Chr.3: 108353642-108353642 on Build GRCh38
1036021	c.145C>A	p.L49I	Chr.3: 108353507-108353507 on Build GRCh38
6297386	c.79G>T	p.A27S	Chr.3: 108353441-108353441 on Build GRCh38
1036023	c.172G>A	p.E58K	Chr.3: 108353534-108353534 on Build GRCh38
5397726	c.204C>T	p.S68S	Chr.3: 108353566-108353566 on Build GRCh38
3914465	c.304G>T	p.G102W	Chr.3: 108353666-108353666 on Build GRCh38
2916734	c.350G>A	p.G117E	Chr.3: 108353712-108353712 on Build GRCh38
1036019	c.141A>G	p.I47M	Chr.3: 108353503-108353503 on Build GRCh38
3584926	c.305G>A	p.G102E	Chr.3: 108353667-108353667 on Build GRCh38
3584928	c.329G>A	p.R110K	Chr.3: 108353691-108353691 on Build GRCh38
5591265	c.382C>T	p.Q128*	Chr.3: 108353744-108353744 on Build GRCh38
3584922	c.237C>T	p.D79D	Chr.3: 108353599-108353599 on Build GRCh38
3584924	c.244G>A	p.E82K	Chr.3: 108353606-108353606 on Build GRCh38
5603743	c.258C>T	p.P86P	Chr.3: 108353620-108353620 on Build GRCh38
5583605	c.166G>A	p.G56R	Chr.3: 108353528-108353528 on Build GRCh38
4112052	c.308A>G	p.N103S	Chr.3: 108353670-108353670 on Build GRCh38
5591263	c.142A>T	p.I48F	Chr.3: 108353504-108353504 on Build GRCh38
3584920	c.155C>T	p.S52L	Chr.3: 108353517-108353517 on Build GRCh38
335628	c.253G>T	p.D85Y	Chr.3: 108353615-108353615 on Build GRCh38
4112048	c.114C>T	p.I38I	Chr.3: 108353476-108353476 on Build GRCh38
4112050	c.179T>C	p.V60A	Chr.3: 108353541-108353541 on Build GRCh38
362218	c.74C>T	p.P25L	Chr.3: 108353436-108353436 on Build GRCh38
4583766	c.171C>T	p.S57S	Chr.3: 108353533-108353533 on Build GRCh38
5863163	c.257C>T	p.P86L	Chr.3: 108353619-108353619 on Build GRCh38
1616679	c.398A>T	p.K133I	Chr.3: 108353760-108353760 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs778652084	Chr.3: 108353462-108353462 on Build GRCh38
rs140364028	Chr.3: 108353540-108353540 on Build GRCh38
rs6779254	Chr.3: 108353451-108353451 on Build GRCh38
rs746832212	Chr.3: 108353476-108353476 on Build GRCh38
rs1055612507	Chr.3: 108353534-108353534 on Build GRCh38
rs975600863	Chr.3: 108353411-108353411 on Build GRCh38
rs752349830	Chr.3: 108353568-108353568 on Build GRCh38
rs774696499	Chr.3: 108353751-108353751 on Build GRCh38
rs371274078	Chr.3: 108353707-108353707 on Build GRCh38
rs375560061	Chr.3: 108353634-108353634 on Build GRCh38
rs915734735	Chr.3: 108353373-108353373 on Build GRCh38
rs367817011	Chr.3: 108353708-108353708 on Build GRCh38
rs1006203038	Chr.3: 108353500-108353500 on Build GRCh38
rs761161559	Chr.3: 108353212-108353212 on Build GRCh38
rs768562499	Chr.3: 108353296-108353296 on Build GRCh38
rs750264144	Chr.3: 108353720-108353720 on Build GRCh38
rs58233893	Chr.3: 108353482-108353482 on Build GRCh38
rs529096683	Chr.3: 108353510-108353510 on Build GRCh38
rs763792651	Chr.3: 108353704-108353704 on Build GRCh38
rs531586600	Chr.3: 108353579-108353579 on Build GRCh38
rs554087388	Chr.3: 108353331-108353331 on Build GRCh38
rs770873611	Chr.3: 108353477-108353477 on Build GRCh38
rs945683591	Chr.3: 108353484-108353484 on Build GRCh38
rs984797711	Chr.3: 108353222-108353222 on Build GRCh38
rs771206254	Chr.3: 108353673-108353673 on Build GRCh38
rs748266514	Chr.3: 108353641-108353641 on Build GRCh38
rs773595188	Chr.3: 108353512-108353512 on Build GRCh38
rs374382407	Chr.3: 108353470-108353470 on Build GRCh38
rs781060461	Chr.3: 108353481-108353481 on Build GRCh38
rs748243757	Chr.3: 108353739-108353739 on Build GRCh38
rs200786656	Chr.3: 108353387-108353387 on Build GRCh38
rs557647742	Chr.3: 108353511-108353513 on Build GRCh38
rs777238594	Chr.3: 108353674-108353674 on Build GRCh38
rs767952028	Chr.3: 108353442-108353442 on Build GRCh38
rs778938592	Chr.3: 108353636-108353636 on Build GRCh38
rs531245052	Chr.3: 108353227-108353227 on Build GRCh38
rs762041589	Chr.3: 108353506-108353506 on Build GRCh38
rs375854823	Chr.3: 108353721-108353721 on Build GRCh38
rs2124740	Chr.3: 108353677-108353677 on Build GRCh38
rs761010314	Chr.3: 108353520-108353520 on Build GRCh38
rs773361909	Chr.3: 108353659-108353659 on Build GRCh38
rs745834506	Chr.3: 108353625-108353625 on Build GRCh38
rs761222441	Chr.3: 108353448-108353448 on Build GRCh38
rs766894660	Chr.3: 108353522-108353522 on Build GRCh38
rs536836404	Chr.3: 108353389-108353389 on Build GRCh38
rs571255744	Chr.3: 108353297-108353297 on Build GRCh38
rs762439322	Chr.3: 108353703-108353703 on Build GRCh38
rs753383127	Chr.3: 108353456-108353456 on Build GRCh38
rs997718374	Chr.3: 108353480-108353480 on Build GRCh38
rs35920413	Chr.3: 108353322-108353323 on Build GRCh38
rs2124741	Chr.3: 108353578-108353578 on Build GRCh38
rs772333265	Chr.3: 108353644-108353644 on Build GRCh38
rs1014692894	Chr.3: 108353254-108353254 on Build GRCh38
rs533857825	Chr.3: 108353324-108353324 on Build GRCh38
rs777649283	Chr.3: 108353474-108353474 on Build GRCh38
rs763063658	Chr.3: 108353409-108353409 on Build GRCh38
rs772232203	Chr.3: 108353507-108353507 on Build GRCh38
rs200858373	Chr.3: 108353754-108353754 on Build GRCh38
rs372159295	Chr.3: 108353632-108353632 on Build GRCh38
rs541551489	Chr.3: 108353471-108353471 on Build GRCh38
rs759052527	Chr.3: 108353539-108353539 on Build GRCh38
rs781114195	Chr.3: 108353615-108353615 on Build GRCh38
rs558884475	Chr.3: 108353441-108353441 on Build GRCh38
rs758419765	Chr.3: 108353750-108353750 on Build GRCh38
rs34201681	Chr.3: 108353646-108353646 on Build GRCh38
rs777334460	Chr.3: 108353603-108353603 on Build GRCh38
rs887108990	Chr.3: 108353640-108353640 on Build GRCh38
rs1039217168	Chr.3: 108353466-108353466 on Build GRCh38
rs780032909	Chr.3: 108353733-108353733 on Build GRCh38
rs6766283	Chr.3: 108353396-108353396 on Build GRCh38
rs771471810	Chr.3: 108353681-108353681 on Build GRCh38
rs761040628	Chr.3: 108353672-108353672 on Build GRCh38
rs78607433	Chr.3: 108353268-108353268 on Build GRCh38
rs370821029	Chr.3: 108353533-108353533 on Build GRCh38
rs371152582	Chr.3: 108353385-108353385 on Build GRCh38
rs544431628	Chr.3: 108353422-108353423 on Build GRCh38
rs750842514	Chr.3: 108353447-108353447 on Build GRCh38
rs991704235	Chr.3: 108353287-108353287 on Build GRCh38
rs774512569	Chr.3: 108353497-108353497 on Build GRCh38
rs958803105	Chr.3: 108353251-108353251 on Build GRCh38
rs778772789	Chr.3: 108353380-108353380 on Build GRCh38
rs909249342	Chr.3: 108353264-108353264 on Build GRCh38
rs751367823	Chr.3: 108353610-108353610 on Build GRCh38
rs199766070	Chr.3: 108353440-108353440 on Build GRCh38
rs1034879827	Chr.3: 108353247-108353247 on Build GRCh38
rs879624681	Chr.3: 108353518-108353518 on Build GRCh38
rs576770303	Chr.3: 108353402-108353402 on Build GRCh38
rs764298694	Chr.3: 108353424-108353424 on Build GRCh38
rs772956692	Chr.3: 108353388-108353388 on Build GRCh38
rs759459866	Chr.3: 108353463-108353463 on Build GRCh38
rs767318616	Chr.3: 108353710-108353710 on Build GRCh38
rs571187309	Chr.3: 108353698-108353698 on Build GRCh38

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