Product Details

SNP ID

rs144141685

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.11:13389032 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GAAAGTCTACATGCCGACTCTTTCC[C/T]TCTTCCTTCTCCCAGGACATTCGAA

Phenotype

MIM: 602550 MIM: 615933

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

ARNTL PubMed Links

Additional Information

For this assay, SNP(s) [rs3833472] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ARNTL

Gene Name

aryl hydrocarbon receptor nuclear translocator like

There are no transcripts associated with this gene.

Gene

BTBD10

Gene Name

BTB domain containing 10

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001297741.1	2606	Intron			NP_001284670.1
NM_001297742.1	2606	Silent Mutation	GAA,GAG	E417E	NP_001284671.1
NM_032320.6	2606	Intron			NP_115696.2
XM_017018405.1	2606	Silent Mutation	GAA,GAG	E452E	XP_016873894.1
XM_017018406.1	2606	Intron			XP_016873895.1
XM_017018407.1	2606	Silent Mutation	GAA,GAG	E444E	XP_016873896.1
XM_017018408.1	2606	Silent Mutation	GAA,GAG	E409E	XP_016873897.1
XM_017018409.1	2606	Intron			XP_016873898.1
XM_017018410.1	2606	Intron			XP_016873899.1
XM_017018411.1	2606	Intron			XP_016873900.1

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