Product Details

SNP ID
rs199842928
Assay Type
Functionally Tested
NCBI dbSNP Submissions
NA
Location
Chr.19:48713365 on Build GRCh38
Set Membership
Context Sequence [VIC/FAM]
GGGGGTGGGGGACCAGAACCCAGAG[A/G]AGGACCCCCGCTCAGGGCCTCCAGC
Phenotype
MIM: 182100 MIM: 610349 MIM: 609623
Polymorphism
A/G, Transition Substitution
Allele Nomenclature
Literature Links
FUT2 PubMed Links
Additional Information
For this assay, SNP(s) [rs554363978] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene
FUT2
Gene Name
fucosyltransferase 2
There are no transcripts associated with this gene.

Gene
LOC105447645
Gene Name
uncharacterized LOC105447645
There are no transcripts associated with this gene.

Gene
MAMSTR
Gene Name
MEF2 activating motif and SAP domain containing transcriptional regulator
Transcript Accession SNP Location SNP Type Codon Change Amino Acid Change Protein ID
NM_001130915.1 1980 Missense Mutation CCT,TCT P384S NP_001124387.1
NM_001297753.1 1980 Missense Mutation CCT,TCT P216S NP_001284682.1
NM_182574.2 1980 Missense Mutation CCT,TCT P281S NP_872380.1
XM_011526807.2 1980 Missense Mutation CCT,TCT P281S XP_011525109.1
XM_011526808.2 1980 Missense Mutation CCT,TCT P447S XP_011525110.1
XM_011526809.2 1980 Missense Mutation CCT,TCT P216S XP_011525111.1
XM_017026640.1 1980 Missense Mutation CCT,TCT P465S XP_016882129.1
XM_017026641.1 1980 Missense Mutation CCT,TCT P452S XP_016882130.1
XM_017026642.1 1980 Intron XP_016882131.1
XM_017026643.1 1980 Missense Mutation CCT,TCT P412S XP_016882132.1
XM_017026644.1 1980 Missense Mutation CCT,TCT P402S XP_016882133.1
XM_017026645.1 1980 Missense Mutation CCT,TCT P216S XP_016882134.1
Gene
RASIP1
Gene Name
Ras interacting protein 1
There are no transcripts associated with this gene.

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