Product Details
- SNP ID
-
rs199842928
- Assay Type
- Functionally Tested
- NCBI dbSNP Submissions
-
NA
- Location
-
Chr.19:48713365 on Build GRCh38
- Set Membership
-
- Context Sequence [VIC/FAM]
- GGGGGTGGGGGACCAGAACCCAGAG[A/G]AGGACCCCCGCTCAGGGCCTCCAGC
- Phenotype
-
MIM: 182100
MIM: 610349
MIM: 609623
- Polymorphism
- A/G, Transition Substitution
- Allele Nomenclature
-
- Literature Links
-
FUT2
PubMed Links
- Additional Information
-
For this assay, SNP(s) [rs554363978] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Details
- Gene
- FUT2
- Gene Name
- fucosyltransferase 2
There are no transcripts associated with this gene.
- Gene
- LOC105447645
- Gene Name
- uncharacterized LOC105447645
There are no transcripts associated with this gene.
- Gene
- MAMSTR
- Gene Name
- MEF2 activating motif and SAP domain containing transcriptional regulator
Transcript Accession |
SNP Location |
SNP Type |
Codon Change |
Amino Acid Change |
Protein ID |
NM_001130915.1 |
1980 |
Missense Mutation |
CCT,TCT |
P384S |
NP_001124387.1 |
NM_001297753.1 |
1980 |
Missense Mutation |
CCT,TCT |
P216S |
NP_001284682.1 |
NM_182574.2 |
1980 |
Missense Mutation |
CCT,TCT |
P281S |
NP_872380.1 |
XM_011526807.2 |
1980 |
Missense Mutation |
CCT,TCT |
P281S |
XP_011525109.1 |
XM_011526808.2 |
1980 |
Missense Mutation |
CCT,TCT |
P447S |
XP_011525110.1 |
XM_011526809.2 |
1980 |
Missense Mutation |
CCT,TCT |
P216S |
XP_011525111.1 |
XM_017026640.1 |
1980 |
Missense Mutation |
CCT,TCT |
P465S |
XP_016882129.1 |
XM_017026641.1 |
1980 |
Missense Mutation |
CCT,TCT |
P452S |
XP_016882130.1 |
XM_017026642.1 |
1980 |
Intron |
|
|
XP_016882131.1 |
XM_017026643.1 |
1980 |
Missense Mutation |
CCT,TCT |
P412S |
XP_016882132.1 |
XM_017026644.1 |
1980 |
Missense Mutation |
CCT,TCT |
P402S |
XP_016882133.1 |
XM_017026645.1 |
1980 |
Missense Mutation |
CCT,TCT |
P216S |
XP_016882134.1 |
- Gene
- RASIP1
- Gene Name
- Ras interacting protein 1
There are no transcripts associated with this gene.
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