Product Details

SNP ID

rs2227556

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.10:73911715 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

GAGCTGGGGTCCTCCGGATTCCATC[C/T]ACAGCAGGGCCAGACTCTCCCCAGG

Phenotype

MIM: 191840

Polymorphism

C/T, Transition Substitution

Allele Nomenclature

Literature Links

C10orf55 PubMed Links

Additional Information

For this assay, SNP(s) [rs371199984] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

C10orf55

Gene Name

chromosome 10 open reading frame 55

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001001791.2	767	Silent Mutation	GTA,GTG	V142V	NP_001001791.2

Gene

PLAU

Gene Name

plasminogen activator, urokinase

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001145031.2	767	UTR 5			NP_001138503.1
NM_001319191.1	767	Intron			NP_001306120.1
NM_002658.4	767	Intron			NP_002649.1
XM_011539866.2	767	Intron			XP_011538168.1

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