Product Details

SNP ID

rs3180493

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.7:92487024 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

TGATATACAAAGAACAGATAATTGT[A/T]TCAGTAGGTAATAGGATATTTTATT

Phenotype

MIM: 604659 MIM: 614518 MIM: 602136

Polymorphism

A/T, Transversion Substitution

Allele Nomenclature

Literature Links

ERVW-1 PubMed Links

Additional Information

For this assay, SNP(s) [rs79220484] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

ERVW-1

Gene Name

endogenous retrovirus group W member 1

There are no transcripts associated with this gene.

Gene

GATAD1

Gene Name

GATA zinc finger domain containing 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_021167.4	4416	Intron			NP_066990.3

Gene

PEX1

Gene Name

peroxisomal biogenesis factor 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_000466.2	4416	UTR 3			NP_000457.1
NM_001282677.1	4416	UTR 3			NP_001269606.1
NM_001282678.1	4416	UTR 3			NP_001269607.1
XM_017012319.1	4416	Intron			XP_016867808.1

View Full Product Details