Product Details

SNP ID

rs1628424

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.3:59747536 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

AGATGAGATGTGGGTGGGGAAACAG[A/C]CAAATCGTATAACTAGGTATGTCCA

Phenotype

MIM: 601153

Polymorphism

A/C, Transversion Substitution

Allele Nomenclature

Literature Links

FHIT PubMed Links

Additional Information

For this assay, SNP(s) [rs115986800] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

FHIT

Gene Name

fragile histidine triad

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001166243.2	5431	UTR 3			NP_001159715.1
NM_001320899.1	5431	UTR 3			NP_001307828.1
NM_001320900.1	5431	UTR 3			NP_001307829.1
NM_001320901.1	5431	UTR 3			NP_001307830.1
NM_002012.3	5431	UTR 3			NP_002003.1
XM_017005880.1	5431	Intron			XP_016861369.1
XM_017005881.1	5431	Intron			XP_016861370.1
XM_017005882.1	5431	Intron			XP_016861371.1
XM_017005883.1	5431	Intron			XP_016861372.1
XM_017005884.1	5431	Intron			XP_016861373.1
XM_017005885.1	5431	Intron			XP_016861374.1
XM_017005886.1	5431	Intron			XP_016861375.1

View Full Product Details