Product Details

SNP ID

rs16954159

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.17:4734254 on Build GRCh38

Set Membership

HapMap

Context Sequence [VIC/FAM]

ACAAAATACACATAGAATTTGTCCA[A/G]GTTATTATCACCCAGTGTGAAAAGC

Phenotype

MIM: 605398 MIM: 612383 MIM: 614312

Polymorphism

A/G, Transition Substitution

Allele Nomenclature

Literature Links

CXCL16 PubMed Links

Additional Information

For this assay, SNP(s) [rs11289101] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CXCL16

Gene Name

C-X-C motif chemokine ligand 16

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001100812.1	1603	Intron			NP_001094282.1
NM_022059.3	1603	UTR 3			NP_071342.2

Gene

MED11

Gene Name

mediator complex subunit 11

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001001683.3	1603	Intron			NP_001001683.1
NM_001305000.1	1603	Intron			NP_001291929.1

Gene

ZMYND15

Gene Name

zinc finger MYND-type containing 15

There are no transcripts associated with this gene.

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