Product Details

SNP ID

rs17855830

Assay Type

Functionally Tested

NCBI dbSNP Submissions

NA

Location

Chr.18:79680128 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CGAGGCCGCCGCCTCCGCGCAGTCC[G/T]CCGGGGCCTCTCAGTCCCGTGTAGC

Phenotype

MIM: 604927

Polymorphism

G/T, Transversion Substitution

Allele Nomenclature

Literature Links

CTDP1 PubMed Links

Additional Information

For this assay, SNP(s) [rs79644263] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Gene Details

Gene

CTDP1

Gene Name

CTD phosphatase subunit 1

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001202504.1	328	Intron			NP_001189433.1
NM_001318511.1	328	Missense Mutation	GCC,TCC	A61S	NP_001305440.1
NM_004715.4	328	Missense Mutation	GCC,TCC	A61S	NP_004706.3
NM_048368.3	328	Missense Mutation	GCC,TCC	A61S	NP_430255.2
XM_011526261.1	328	Missense Mutation	GCC,TCC	A61S	XP_011524563.1
XM_017026078.1	328	Intron			XP_016881567.1

Gene

LOC105376875

Gene Name

uncharacterized LOC105376875

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
XM_011526290.2	328	Intron			XP_011524592.1
XM_011526292.2	328	Intron			XP_011524594.1
XM_017026112.1	328	Intron			XP_016881601.1

Gene

LOC284241

Gene Name

uncharacterized LOC284241

There are no transcripts associated with this gene.

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