Product Details

SNP ID

rs34410271

Assay Type

Functionally tested

NCBI dbSNP Submissions

NA

Location

Chr.10:86666180 on Build GRCh38

Set Membership

Context Sequence [VIC/FAM]

CCAGCCCCGCATCTCCCACTGCCAA[C/G]AGCTGAAGCCGAGCACAGACCTCCC

Phenotype

MIM: 605906 MIM: 606665

Polymorphism

C/G, Transversion substitution

Allele Nomenclature

Literature Links

LDB3 PubMed Links

Gene Details

Gene

LDB3

Gene Name

LIM domain binding 3

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001080114.1	2923	Intron			NP_001073583.1
NM_001080115.1	2923	Intron			NP_001073584.1
NM_001080116.1	2923	Intron			NP_001073585.1
NM_001171610.1	2923	Intron			NP_001165081.1
NM_001171611.1	2923	Intron			NP_001165082.1
NM_007078.2	2923	Intron			NP_009009.1
XM_005269464.4	2923	Intron			XP_005269521.1
XM_005269466.4	2923	Intron			XP_005269523.1
XM_005269468.4	2923	Intron			XP_005269525.1
XM_011539184.2	2923	Intron			XP_011537486.1
XM_011539185.2	2923	UTR 5			XP_011537487.1
XM_011539186.2	2923	Intron			XP_011537488.1
XM_011539187.2	2923	Intron			XP_011537489.1
XM_011539188.2	2923	Intron			XP_011537490.1
XM_011539189.1	2923	Intron			XP_011537491.1
XM_011539190.1	2923	Intron			XP_011537492.1
XM_011539191.2	2923	Intron			XP_011537493.1
XM_011539193.1	2923	Intron			XP_011537495.1
XM_011539194.1	2923	Intron			XP_011537496.1
XM_011539195.2	2923	Intron			XP_011537497.1
XM_017015606.1	2923	UTR 5			XP_016871095.1
XM_017015607.1	2923	Intron			XP_016871096.1
XM_017015608.1	2923	UTR 5			XP_016871097.1
XM_017015609.1	2923	Intron			XP_016871098.1

Gene

OPN4

Gene Name

opsin 4

Transcript Accession	SNP Location	SNP Type	Codon Change	Amino Acid Change	Protein ID
NM_001030015.2	2923	UTR 3			NP_001025186.1
NM_033282.3	2923	UTR 3			NP_150598.1
XM_017016955.1	2923	Intron			XP_016872444.1
XM_017016956.1	2923	Intron			XP_016872445.1
XM_017016957.1	2923	UTR 3			XP_016872446.1

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