Product Details

Primer Sequences

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Primer Chromosome Location

Chr.11: 99956720-99957226 on Build GRCh38 View in UCSC browser

Format

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer^™ Tool Quick Reference

Ampliseq ID's

Gene Details

Gene Symbol

CNTN5

Entrez Gene ID

53942

Gene Name

contactin 5

Gene Aliases

HNB-2s, NB-2

UniGene

Hs.656783

Gene Chromosome Location

Chr.11: 99020904-100358885 on Build GRCh38

Transcripts

NM_001243270.1 NM_001243271.1 NM_014361.3 NM_175566.2 XM_011542871.1 XM_011542873.1 XM_017017926.1 XM_017017927.1 XM_017017928.1 XM_017017929.1

Cosmic Detail

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Cosmic ID	Mutation	AA	Transcript Location
3870501	c.787G>A	p.D263N	Chr.11: 99956919-99956919 on Build GRCh38
2062250	c.728G>T	p.S243I	Chr.11: 99956860-99956860 on Build GRCh38
933722	c.784T>G	p.S262A	Chr.11: 99956916-99956916 on Build GRCh38
5603239	c.678C>T	p.I226I	Chr.11: 99956810-99956810 on Build GRCh38
6631808	c.869G>A	p.R290H	Chr.11: 99957001-99957001 on Build GRCh38
3870497	c.675G>A	p.E225E	Chr.11: 99956807-99956807 on Build GRCh38
2062246	c.697A>G	p.N233D	Chr.11: 99956829-99956829 on Build GRCh38
4574917	c.730C>T	p.R244W	Chr.11: 99956862-99956862 on Build GRCh38
3454893	c.743C>T	p.S248F	Chr.11: 99956875-99956875 on Build GRCh38
4505906	c.705C>T	p.F235F	Chr.11: 99956837-99956837 on Build GRCh38
690845	c.780A>T	p.Q260H	Chr.11: 99956912-99956912 on Build GRCh38
5373906	c.851C>T	p.P284L	Chr.11: 99956983-99956983 on Build GRCh38
7239791	c.755G>A	p.G252D	Chr.11: 99956887-99956887 on Build GRCh38
4921041	c.840C>T	p.V280V	Chr.11: 99956972-99956972 on Build GRCh38
4037829	c.841C>T	p.L281F	Chr.11: 99956973-99956973 on Build GRCh38
3454896	c.744C>T	p.S248S	Chr.11: 99956876-99956876 on Build GRCh38
1146863	c.780A>T	p.Q260H	Chr.11: 99956912-99956912 on Build GRCh38
7239792	c.755G>A	p.G252D	Chr.11: 99956887-99956887 on Build GRCh38
2062263	c.847C>T	p.P283S	Chr.11: 99956979-99956979 on Build GRCh38
5890573	c.874G>A	p.D292N	Chr.11: 99957006-99957006 on Build GRCh38
3454892	c.711C>T	p.S237S	Chr.11: 99956843-99956843 on Build GRCh38
3810739	c.815A>G	p.K272R	Chr.11: 99956947-99956947 on Build GRCh38
1586106	c.855G>A	p.T285T	Chr.11: 99956987-99956987 on Build GRCh38
5692457	c.684T>C	p.Y228Y	Chr.11: 99956816-99956816 on Build GRCh38
3772215	c.681C>T	p.I227I	Chr.11: 99956813-99956813 on Build GRCh38
2062247	c.720G>A	p.A240A	Chr.11: 99956852-99956852 on Build GRCh38
3772214	c.681C>T	p.I227I	Chr.11: 99956813-99956813 on Build GRCh38
1358079	c.719C>T	p.A240V	Chr.11: 99956851-99956851 on Build GRCh38
4037830	c.868C>T	p.R290C	Chr.11: 99957000-99957000 on Build GRCh38
260189	c.828G>A	p.T276T	Chr.11: 99956960-99956960 on Build GRCh38
4505905	c.705C>T	p.F235F	Chr.11: 99956837-99956837 on Build GRCh38
5603240	c.678C>T	p.I226I	Chr.11: 99956810-99956810 on Build GRCh38
5839867	c.721G>A	p.E241K	Chr.11: 99956853-99956853 on Build GRCh38
6631801	c.814delA	p.N273fs*3	Chr.11: 99956946-99956946 on Build GRCh38
7171357	c.854C>T	p.T285M	Chr.11: 99956986-99956986 on Build GRCh38
7171358	c.854C>T	p.T285M	Chr.11: 99956986-99956986 on Build GRCh38
5657661	c.793G>T	p.G265C	Chr.11: 99956925-99956925 on Build GRCh38
6395150	c.812T>C	p.V271A	Chr.11: 99956944-99956944 on Build GRCh38
5890574	c.874G>A	p.D292N	Chr.11: 99957006-99957006 on Build GRCh38
1201683	c.734G>A	p.R245Q	Chr.11: 99956866-99956866 on Build GRCh38
933723	c.855G>A	p.T285T	Chr.11: 99956987-99956987 on Build GRCh38
1201684	c.734G>A	p.R245Q	Chr.11: 99956866-99956866 on Build GRCh38
4557596	c.734G>C	p.R245P	Chr.11: 99956866-99956866 on Build GRCh38
5692458	c.684T>C	p.Y228Y	Chr.11: 99956816-99956816 on Build GRCh38
3870500	c.741C>T	p.I247I	Chr.11: 99956873-99956873 on Build GRCh38
5839868	c.721G>A	p.E241K	Chr.11: 99956853-99956853 on Build GRCh38
2062264	c.847C>T	p.P283S	Chr.11: 99956979-99956979 on Build GRCh38
3454895	c.744C>T	p.S248S	Chr.11: 99956876-99956876 on Build GRCh38
3383954	c.874G>T	p.D292Y	Chr.11: 99957006-99957006 on Build GRCh38
3870499	c.741C>T	p.I247I	Chr.11: 99956873-99956873 on Build GRCh38
2062248	c.720G>A	p.A240A	Chr.11: 99956852-99956852 on Build GRCh38
3454891	c.711C>T	p.S237S	Chr.11: 99956843-99956843 on Build GRCh38
4831590	c.854C>G	p.T285R	Chr.11: 99956986-99956986 on Build GRCh38
4037831	c.868C>T	p.R290C	Chr.11: 99957000-99957000 on Build GRCh38
6631802	c.814delA	p.N273fs*3	Chr.11: 99956946-99956946 on Build GRCh38
6135058	c.734G>T	p.R245L	Chr.11: 99956866-99956866 on Build GRCh38
6395149	c.812T>C	p.V271A	Chr.11: 99956944-99956944 on Build GRCh38
3454894	c.743C>T	p.S248F	Chr.11: 99956875-99956875 on Build GRCh38
4557595	c.734G>C	p.R245P	Chr.11: 99956866-99956866 on Build GRCh38
5657662	c.793G>T	p.G265C	Chr.11: 99956925-99956925 on Build GRCh38
2062249	c.728G>T	p.S243I	Chr.11: 99956860-99956860 on Build GRCh38
5547425	c.829delA	p.N277fs*18	Chr.11: 99956961-99956961 on Build GRCh38
3810740	c.815A>G	p.K272R	Chr.11: 99956947-99956947 on Build GRCh38
7213568	c.851C>A	p.P284Q	Chr.11: 99956983-99956983 on Build GRCh38
2062245	c.697A>G	p.N233D	Chr.11: 99956829-99956829 on Build GRCh38
5528871	c.717G>A	p.V239V	Chr.11: 99956849-99956849 on Build GRCh38
5451199	c.806G>A	p.C269Y	Chr.11: 99956938-99956938 on Build GRCh38
1586107	c.784T>G	p.S262A	Chr.11: 99956916-99956916 on Build GRCh38
3792074	c.690G>T	p.W230C	Chr.11: 99956822-99956822 on Build GRCh38
4037828	c.841C>T	p.L281F	Chr.11: 99956973-99956973 on Build GRCh38
3792073	c.690G>T	p.W230C	Chr.11: 99956822-99956822 on Build GRCh38
4831589	c.854C>G	p.T285R	Chr.11: 99956986-99956986 on Build GRCh38
1358080	c.719C>T	p.A240V	Chr.11: 99956851-99956851 on Build GRCh38
5932739	c.778C>T	p.Q260*	Chr.11: 99956910-99956910 on Build GRCh38
7213569	c.851C>A	p.P284Q	Chr.11: 99956983-99956983 on Build GRCh38
6631807	c.869G>A	p.R290H	Chr.11: 99957001-99957001 on Build GRCh38
3954015	c.689G>T	p.W230L	Chr.11: 99956821-99956821 on Build GRCh38
6135057	c.734G>T	p.R245L	Chr.11: 99956866-99956866 on Build GRCh38
3954014	c.689G>T	p.W230L	Chr.11: 99956821-99956821 on Build GRCh38
5451198	c.806G>A	p.C269Y	Chr.11: 99956938-99956938 on Build GRCh38
389890	c.683A>G	p.Y228C	Chr.11: 99956815-99956815 on Build GRCh38
4574918	c.730C>T	p.R244W	Chr.11: 99956862-99956862 on Build GRCh38
3870502	c.787G>A	p.D263N	Chr.11: 99956919-99956919 on Build GRCh38
5373907	c.851C>T	p.P284L	Chr.11: 99956983-99956983 on Build GRCh38
4921042	c.840C>T	p.V280V	Chr.11: 99956972-99956972 on Build GRCh38
5547426	c.829delA	p.N277fs*18	Chr.11: 99956961-99956961 on Build GRCh38
3870498	c.675G>A	p.E225E	Chr.11: 99956807-99956807 on Build GRCh38
5932738	c.778C>T	p.Q260*	Chr.11: 99956910-99956910 on Build GRCh38
3383953	c.874G>T	p.D292Y	Chr.11: 99957006-99957006 on Build GRCh38
5528872	c.717G>A	p.V239V	Chr.11: 99956849-99956849 on Build GRCh38

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SNP Detail

SNP ID	Chromosome Location
rs200945111	Chr.11: 99957026-99957026 on Build GRCh38
rs749442209	Chr.11: 99956852-99956852 on Build GRCh38
rs752003777	Chr.11: 99957041-99957041 on Build GRCh38
rs1048462384	Chr.11: 99957082-99957082 on Build GRCh38
rs549484645	Chr.11: 99957032-99957032 on Build GRCh38
rs774698713	Chr.11: 99956813-99956813 on Build GRCh38
rs371755605	Chr.11: 99956856-99956856 on Build GRCh38
rs140553641	Chr.11: 99957079-99957080 on Build GRCh38
rs1010788117	Chr.11: 99957140-99957140 on Build GRCh38
rs376992677	Chr.11: 99956989-99956989 on Build GRCh38
rs779073851	Chr.11: 99956944-99956944 on Build GRCh38
rs749565155	Chr.11: 99956792-99956792 on Build GRCh38
rs998379407	Chr.11: 99957131-99957131 on Build GRCh38
rs190220140	Chr.11: 99956862-99956862 on Build GRCh38
rs897258814	Chr.11: 99957079-99957079 on Build GRCh38
rs749373857	Chr.11: 99957105-99957109 on Build GRCh38
rs997873541	Chr.11: 99957081-99957081 on Build GRCh38
rs1030669886	Chr.11: 99957088-99957088 on Build GRCh38
rs764099716	Chr.11: 99956921-99956921 on Build GRCh38
rs750705149	Chr.11: 99956956-99956956 on Build GRCh38
rs574144977	Chr.11: 99956761-99956761 on Build GRCh38
rs748684510	Chr.11: 99957059-99957059 on Build GRCh38
rs1022549168	Chr.11: 99957152-99957152 on Build GRCh38
rs918880916	Chr.11: 99956914-99956914 on Build GRCh38
rs182352064	Chr.11: 99957197-99957197 on Build GRCh38
rs748840124	Chr.11: 99956995-99956995 on Build GRCh38
rs758676568	Chr.11: 99956960-99956960 on Build GRCh38
rs577962852	Chr.11: 99956851-99956851 on Build GRCh38
rs202063081	Chr.11: 99956806-99956806 on Build GRCh38
rs200102673	Chr.11: 99957018-99957018 on Build GRCh38
rs978434230	Chr.11: 99956990-99956990 on Build GRCh38
rs766211231	Chr.11: 99956844-99956844 on Build GRCh38
rs1034423867	Chr.11: 99957184-99957184 on Build GRCh38
rs760662211	Chr.11: 99956908-99956908 on Build GRCh38
rs751415649	Chr.11: 99956846-99956846 on Build GRCh38
rs764046886	Chr.11: 99957025-99957025 on Build GRCh38
rs557580919	Chr.11: 99956755-99956755 on Build GRCh38
rs199802165	Chr.11: 99956888-99956888 on Build GRCh38
rs752723139	Chr.11: 99956848-99956848 on Build GRCh38
rs572094429	Chr.11: 99956818-99956818 on Build GRCh38
rs369374416	Chr.11: 99956892-99956892 on Build GRCh38
rs540994363	Chr.11: 99956823-99956823 on Build GRCh38
rs1020840120	Chr.11: 99957143-99957143 on Build GRCh38
rs965992934	Chr.11: 99957126-99957126 on Build GRCh38
rs781749561	Chr.11: 99957052-99957052 on Build GRCh38
rs746068381	Chr.11: 99957173-99957173 on Build GRCh38
rs375312209	Chr.11: 99957078-99957079 on Build GRCh38
rs932360963	Chr.11: 99957132-99957132 on Build GRCh38
rs960113690	Chr.11: 99957189-99957189 on Build GRCh38
rs199557862	Chr.11: 99956858-99956858 on Build GRCh38
rs200560123	Chr.11: 99956842-99956842 on Build GRCh38
rs771277271	Chr.11: 99956811-99956811 on Build GRCh38
rs1007289509	Chr.11: 99957102-99957107 on Build GRCh38
rs780533843	Chr.11: 99956961-99956961 on Build GRCh38
rs199898141	Chr.11: 99956991-99956991 on Build GRCh38
rs766153259	Chr.11: 99956891-99956891 on Build GRCh38
rs942463692	Chr.11: 99957065-99957065 on Build GRCh38
rs1039443653	Chr.11: 99957078-99957078 on Build GRCh38
rs773493367	Chr.11: 99956899-99956899 on Build GRCh38
rs773856381	Chr.11: 99957001-99957001 on Build GRCh38
rs888584011	Chr.11: 99957051-99957051 on Build GRCh38
rs563536789	Chr.11: 99956866-99956866 on Build GRCh38
rs917139202	Chr.11: 99957068-99957068 on Build GRCh38
rs969224120	Chr.11: 99957177-99957177 on Build GRCh38
rs755508153	Chr.11: 99957048-99957048 on Build GRCh38
rs775365705	Chr.11: 99957019-99957019 on Build GRCh38
rs201219815	Chr.11: 99956863-99956863 on Build GRCh38
rs949935458	Chr.11: 99957072-99957072 on Build GRCh38
rs145075779	Chr.11: 99957182-99957182 on Build GRCh38
rs757312285	Chr.11: 99956985-99956985 on Build GRCh38
rs200899470	Chr.11: 99956977-99956977 on Build GRCh38
rs751262157	Chr.11: 99956778-99956778 on Build GRCh38
rs777370237	Chr.11: 99956986-99956986 on Build GRCh38
rs370878735	Chr.11: 99956934-99956934 on Build GRCh38
rs767375808	Chr.11: 99956883-99956883 on Build GRCh38
rs370012927	Chr.11: 99957080-99957080 on Build GRCh38
rs761196266	Chr.11: 99956833-99956833 on Build GRCh38
rs766335817	Chr.11: 99956768-99956768 on Build GRCh38
rs371756154	Chr.11: 99956904-99956904 on Build GRCh38
rs772853483	Chr.11: 99956878-99956878 on Build GRCh38
rs764850156	Chr.11: 99956837-99956837 on Build GRCh38
rs199670730	Chr.11: 99956938-99956938 on Build GRCh38
rs756128950	Chr.11: 99956849-99956849 on Build GRCh38
rs765358335	Chr.11: 99957027-99957027 on Build GRCh38
rs759302485	Chr.11: 99957014-99957014 on Build GRCh38
rs772984856	Chr.11: 99956840-99956840 on Build GRCh38
rs529063149	Chr.11: 99956980-99956980 on Build GRCh38
rs202177289	Chr.11: 99956756-99956756 on Build GRCh38
rs780226403	Chr.11: 99957034-99957034 on Build GRCh38
rs200237479	Chr.11: 99956771-99956771 on Build GRCh38
rs200451910	Chr.11: 99956898-99956898 on Build GRCh38
rs201937561	Chr.11: 99956933-99956933 on Build GRCh38
rs112148988	Chr.11: 99956779-99956779 on Build GRCh38
rs537252996	Chr.11: 99956751-99956751 on Build GRCh38
rs35581997	Chr.11: 99956939-99956940 on Build GRCh38
rs892410607	Chr.11: 99957115-99957115 on Build GRCh38
rs746247673	Chr.11: 99956861-99956861 on Build GRCh38
rs754877840	Chr.11: 99956775-99956775 on Build GRCh38
rs201012221	Chr.11: 99956997-99956997 on Build GRCh38
rs201760493	Chr.11: 99957010-99957010 on Build GRCh38
rs771764286	Chr.11: 99957013-99957013 on Build GRCh38
rs752639831	Chr.11: 99956922-99956922 on Build GRCh38
rs779028608	Chr.11: 99957000-99957000 on Build GRCh38
rs758651484	Chr.11: 99957033-99957033 on Build GRCh38
rs201895126	Chr.11: 99956982-99956982 on Build GRCh38
rs967093176	Chr.11: 99956963-99956963 on Build GRCh38
rs201326352	Chr.11: 99956847-99956847 on Build GRCh38

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