Product Details

Primer Sequences
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Primer Chromosome Location
Chr.16: 10895550-10896056 on Build GRCh38
Format
Each primer will be delivered in a single tube, dried-down
Quick Reference Guide
Primer Designer™ Tool Quick Reference
Ampliseq ID's

Gene Details

Gene Symbol
CIITA
Entrez Gene ID
4261
Gene Name
class II, major histocompatibility complex, transactivator
Gene Aliases
C2TA, CIITAIV, MHC2TA, NLRA
UniGene
Hs.592051
Gene Chromosome Location
Chr.16: 10866208-10941562 on Build GRCh38
Transcripts
NM_000246.3 NM_001286402.1 NM_001286403.1 NR_104444.1 XM_006720880.3 XM_011522484.2 XM_011522485.2 XM_011522486.2 XM_011522487.2 XM_011522488.2 XM_011522489.2 XM_011522490.2 XM_011522491.2 XM_011522492.2 XM_011522493.2 XM_011522494.2 XM_011522495.2 XM_011522496.2

Cosmic Detail

Cosmic ID Mutation AA Transcript Location
5124500 c.295G>A p.A99T Chr.16: 10895764-10895764 on Build GRCh38
6845571 c.259G>A p.G87S Chr.16: 10895728-10895728 on Build GRCh38
138999 c.265G>T p.E89* Chr.16: 10895734-10895734 on Build GRCh38
5850136 c.211G>A p.D71N Chr.16: 10895680-10895680 on Build GRCh38
3505729 c.202C>T p.P68S Chr.16: 10895671-10895671 on Build GRCh38
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SNP Detail

SNP ID Chromosome Location
rs749969682 Chr.16: 10895774-10895774 on Build GRCh38
rs995854874 Chr.16: 10895935-10895935 on Build GRCh38
rs564890202 Chr.16: 10895819-10895819 on Build GRCh38
rs149531285 Chr.16: 10895745-10895745 on Build GRCh38
rs955183519 Chr.16: 10895595-10895595 on Build GRCh38
rs755366666 Chr.16: 10895782-10895782 on Build GRCh38
rs1008731084 Chr.16: 10895899-10895899 on Build GRCh38
rs202209200 Chr.16: 10895643-10895643 on Build GRCh38
rs1011255983 Chr.16: 10895872-10895872 on Build GRCh38
rs191297468 Chr.16: 10895985-10895985 on Build GRCh38
rs149253747 Chr.16: 10895755-10895755 on Build GRCh38
rs778238111 Chr.16: 10895660-10895660 on Build GRCh38
rs755717247 Chr.16: 10895633-10895633 on Build GRCh38
rs45601738 Chr.16: 10895913-10895913 on Build GRCh38
rs932180248 Chr.16: 10895878-10895878 on Build GRCh38
rs1021556728 Chr.16: 10895941-10895941 on Build GRCh38
rs746040393 Chr.16: 10895812-10895812 on Build GRCh38
rs981635207 Chr.16: 10896026-10896026 on Build GRCh38
rs753690964 Chr.16: 10895657-10895657 on Build GRCh38
rs747429995 Chr.16: 10895681-10895681 on Build GRCh38
rs1027295718 Chr.16: 10895944-10895944 on Build GRCh38
rs2229318 Chr.16: 10895694-10895694 on Build GRCh38
rs908059137 Chr.16: 10895721-10895721 on Build GRCh38
rs200299817 Chr.16: 10895763-10895763 on Build GRCh38
rs748559474 Chr.16: 10895708-10895708 on Build GRCh38
rs371530390 Chr.16: 10895770-10895770 on Build GRCh38
rs970272126 Chr.16: 10895951-10895951 on Build GRCh38
rs575100101 Chr.16: 10895893-10895893 on Build GRCh38
rs751181416 Chr.16: 10895781-10895781 on Build GRCh38
rs773511573 Chr.16: 10895618-10895618 on Build GRCh38
rs769935433 Chr.16: 10895715-10895715 on Build GRCh38
rs546218757 Chr.16: 10895948-10895948 on Build GRCh38
rs900696561 Chr.16: 10895877-10895877 on Build GRCh38
rs538497415 Chr.16: 10895644-10895644 on Build GRCh38
rs746175759 Chr.16: 10895989-10895989 on Build GRCh38
rs749431463 Chr.16: 10895795-10895795 on Build GRCh38
rs756206458 Chr.16: 10895571-10895571 on Build GRCh38
rs374837723 Chr.16: 10895807-10895807 on Build GRCh38
rs1011530428 Chr.16: 10895922-10895922 on Build GRCh38
rs1021226602 Chr.16: 10895573-10895573 on Build GRCh38
rs550975080 Chr.16: 10895990-10895990 on Build GRCh38
rs774749138 Chr.16: 10895809-10895809 on Build GRCh38
rs577294310 Chr.16: 10895756-10895756 on Build GRCh38
rs764180607 Chr.16: 10895654-10895654 on Build GRCh38
rs199476061 Chr.16: 10895676-10895676 on Build GRCh38
rs112570822 Chr.16: 10895785-10895785 on Build GRCh38
rs45474796 Chr.16: 10895659-10895659 on Build GRCh38
rs559588184 Chr.16: 10896000-10896000 on Build GRCh38
rs1037815970 Chr.16: 10895863-10895863 on Build GRCh38
rs74007574 Chr.16: 10895995-10895995 on Build GRCh38
rs558934458 Chr.16: 10895607-10895607 on Build GRCh38
rs942273210 Chr.16: 10896007-10896007 on Build GRCh38
rs763945425 Chr.16: 10895760-10895760 on Build GRCh38
rs983692094 Chr.16: 10895719-10895719 on Build GRCh38
rs760536146 Chr.16: 10895647-10895647 on Build GRCh38
rs979963689 Chr.16: 10895975-10895975 on Build GRCh38
rs772790157 Chr.16: 10896029-10896029 on Build GRCh38
rs757888829 Chr.16: 10895776-10895776 on Build GRCh38
rs778332938 Chr.16: 10895794-10895794 on Build GRCh38
rs987647521 Chr.16: 10895649-10895649 on Build GRCh38
rs951727620 Chr.16: 10895955-10895955 on Build GRCh38
rs942325282 Chr.16: 10895823-10895823 on Build GRCh38
rs761597254 Chr.16: 10895764-10895764 on Build GRCh38
rs45601437 Chr.16: 10895897-10895897 on Build GRCh38
rs748699521 Chr.16: 10895786-10895786 on Build GRCh38
rs138389258 Chr.16: 10895727-10895727 on Build GRCh38
rs964438968 Chr.16: 10895914-10895914 on Build GRCh38
rs749526744 Chr.16: 10895741-10895741 on Build GRCh38
rs749556565 Chr.16: 10895703-10895703 on Build GRCh38
rs1027973762 Chr.16: 10895582-10895582 on Build GRCh38
rs200879588 Chr.16: 10895669-10895669 on Build GRCh38
rs529628805 Chr.16: 10895934-10895934 on Build GRCh38
rs756508848 Chr.16: 10895791-10895791 on Build GRCh38
rs532965860 Chr.16: 10895690-10895690 on Build GRCh38
rs143732812 Chr.16: 10895683-10895683 on Build GRCh38
rs750105787 Chr.16: 10895665-10895665 on Build GRCh38

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